Gene PICST_29675 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_29675 
Symbol 
ID4837191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp845148 
End bp846086 
Gene Length939 bp 
Protein Length312 aa 
Translation table12 
GC content39% 
IMG OID640388506 
Productpredicted protein 
Protein accessionXP_001382398 
Protein GI150863801 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.110363 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTATTA TTGTGATCAG CCATCCTTCG AATTTTGCCG CTTACCTCCT AGCAGCAACA 
ATTTTGTTGT ACTACGAGCA TCAATCTCGT AGTCTAAAGA TAGTTATTGT AGAGGATTTT
GCTGCAAATC GAGGCGGAAT ACAAGATTTC AAGCCCTGGT GCGGAGTGAA CACTTTGAGC
AACCCCAGAT TTCAATATGG TGACTTTATG GTACGAGAAT TACTCAATAG GCTACTTTTG
GCAAATAGAG ATTTGGGAAT AGTGCCCTTA GATAGAATAA ATTTGAGTCT TACACCTCGG
AATGGATACA ATTTGGACAT GCCTATCCAT GTTCAACAGG AGCAGATCAC CGTTTCAGTT
GCAGAACAGA CTAATGGTAT TGGTGTAGGA AATAGTAGTA TAGTAGCTTT GGTGTATCAT
CCAAGTATGG TGATGAACAA GTTGAGATTC TTGATTTACA ATACTGGCAG GGTGACATTT
ACATCTCTTA ACACTAGATT TGGAAGTTTG GGTGTATTCG CTGAGAGTCT AACTGGAGGG
ACTACCTTCA AAGAAGAGAT TGTAGTTTTG GATTGTTCAA ATTCTGGAAA GGTATCCTAT
TCAGACAACA TTGACTACTT GATAAATTCA AATTCCATTT CAGTGAGACT GTTGGAAGGC
AATAACAGTA GAAGATTGCC TTCTTACATA TTATGGTTGC CTAGAATTGC GAATAAGGCC
CATTCCCAGA CTCTCAATGA CTGGAAGTAT GGCTACAGAC AATATAACAA GAGAATCATA
GAAGTTGTCA TCAGCAACGA CAACACCAAC CAAATAGAGA GTAGAATACT TCTGGAAGTC
GATATCTACT GCGGCCTCAA ATTGGGAGAT TTGGCATTGC ATGTGTTGGA AGAATTAACT
AATCTGGGTA TGGTTGACTT GATATCAAGA AAGCTATAG
 
Protein sequence
MAIIVISHPS NFAAYLLAAT ILLYYEHQSR SLKIVIVEDF AANRGGIQDF KPWCGVNTLS 
NPRFQYGDFM VRELLNRLLL ANRDLGIVPL DRINLSLTPR NGYNLDMPIH VQQEQITVSV
AEQTNGIGVG NSSIVALVYH PSMVMNKLRF LIYNTGRVTF TSLNTRFGSL GVFAESLTGG
TTFKEEIVVL DCSNSGKVSY SDNIDYLINS NSISVRSLEG NNSRRLPSYI LWLPRIANKA
HSQTLNDWKY GYRQYNKRII EVVISNDNTN QIESRILSEV DIYCGLKLGD LALHVLEELT
NSGMVDLISR KL