Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_29675 |
Symbol | |
ID | 4837191 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | + |
Start bp | 845148 |
End bp | 846086 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 12 |
GC content | 39% |
IMG OID | 640388506 |
Product | predicted protein |
Protein accession | XP_001382398 |
Protein GI | 150863801 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.110363 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTATTA TTGTGATCAG CCATCCTTCG AATTTTGCCG CTTACCTCCT AGCAGCAACA ATTTTGTTGT ACTACGAGCA TCAATCTCGT AGTCTAAAGA TAGTTATTGT AGAGGATTTT GCTGCAAATC GAGGCGGAAT ACAAGATTTC AAGCCCTGGT GCGGAGTGAA CACTTTGAGC AACCCCAGAT TTCAATATGG TGACTTTATG GTACGAGAAT TACTCAATAG GCTACTTTTG GCAAATAGAG ATTTGGGAAT AGTGCCCTTA GATAGAATAA ATTTGAGTCT TACACCTCGG AATGGATACA ATTTGGACAT GCCTATCCAT GTTCAACAGG AGCAGATCAC CGTTTCAGTT GCAGAACAGA CTAATGGTAT TGGTGTAGGA AATAGTAGTA TAGTAGCTTT GGTGTATCAT CCAAGTATGG TGATGAACAA GTTGAGATTC TTGATTTACA ATACTGGCAG GGTGACATTT ACATCTCTTA ACACTAGATT TGGAAGTTTG GGTGTATTCG CTGAGAGTCT AACTGGAGGG ACTACCTTCA AAGAAGAGAT TGTAGTTTTG GATTGTTCAA ATTCTGGAAA GGTATCCTAT TCAGACAACA TTGACTACTT GATAAATTCA AATTCCATTT CAGTGAGACT GTTGGAAGGC AATAACAGTA GAAGATTGCC TTCTTACATA TTATGGTTGC CTAGAATTGC GAATAAGGCC CATTCCCAGA CTCTCAATGA CTGGAAGTAT GGCTACAGAC AATATAACAA GAGAATCATA GAAGTTGTCA TCAGCAACGA CAACACCAAC CAAATAGAGA GTAGAATACT TCTGGAAGTC GATATCTACT GCGGCCTCAA ATTGGGAGAT TTGGCATTGC ATGTGTTGGA AGAATTAACT AATCTGGGTA TGGTTGACTT GATATCAAGA AAGCTATAG
|
Protein sequence | MAIIVISHPS NFAAYLLAAT ILLYYEHQSR SLKIVIVEDF AANRGGIQDF KPWCGVNTLS NPRFQYGDFM VRELLNRLLL ANRDLGIVPL DRINLSLTPR NGYNLDMPIH VQQEQITVSV AEQTNGIGVG NSSIVALVYH PSMVMNKLRF LIYNTGRVTF TSLNTRFGSL GVFAESLTGG TTFKEEIVVL DCSNSGKVSY SDNIDYLINS NSISVRSLEG NNSRRLPSYI LWLPRIANKA HSQTLNDWKY GYRQYNKRII EVVISNDNTN QIESRILSEV DIYCGLKLGD LALHVLEELT NSGMVDLISR KL
|
| |