Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_29665 |
Symbol | |
ID | 4837026 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | - |
Start bp | 815021 |
End bp | 815958 |
Gene Length | 938 bp |
Protein Length | 273 aa |
Translation table | 12 |
GC content | 42% |
IMG OID | 640388341 |
Product | predicted protein |
Protein accession | XP_001382929 |
Protein GI | 150864201 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATAG GCACAATTGT CTTGGGGCTT ATCTACATAG TGCAAGCATC TGCACAGACC TTCAATCAGA ACAGGAGGCT TATAAATGAC GCTGCAGCAT TGGACCCAGA CAACTTGAAC TGGGATCCTC ATAGCAAAGA CGCACTATTA ATACGTGATA GAGAAATTTA TACTGTCGGG TATGCTTCTT ACAGCGACAA CAGTATGACT TTGTATCAAA TAGAAACCAA CTCTAATAGC ACCGATGAGA TAAAAGAACA AATAATATGT GGTATAAACG CAGTGCATAG CAAACACAGC GAGATTTCCG TAGACAAGCT CCACTATATT TACCATAATA GTCACTTGTT GCAGAATCGT TTTAGAAGGA GAGAACCTTA CCAAGAGAGC CATGAAGAAG GAGTTCTTAC AGTTGTTTTG TCATACGGCT CAGAAGAAAT CGGATCTGCT ATTAAGCTGA TCGGATCTGA CGTTTCATTT CTAACGGACC CATTGAATGT TAATTGTGCT CATGGTGGTG CAGAGTGTCC TGGAAACACT AGGATTGTTG GGTTTGGTGG TACTTGTGCT GACGCTGTCG GAACAGTAAA CATAGCCTCG TATGTAGACA GTAGTAATAC TACAGTGGCC CAGTCGAAGT TGAATGAGGG AGCAGAATGG GCCGACCACG TAATAGAGAA TAATCAGTCT GTGGGCTCAT GGAAAGTTGG CTTCAACGAC TCTGGTTTGT GGAATTTAAT TATACGAATT ATTCGGAATA ATGAGTGTCG GAATGGTTTA GAGCCTTGTA AGCTCGCTTC ACCAAGACGC TCATCGGTCA ATTATTGCCC ATCCTGGCGA GTACTTGGCC TGGATATGCA AAATGCATTT TTTTTCTTGA ATTATAGTAC TTCTAATTAA TAGCATACCG AATCAAGAGC CAGAGATACA TGGTGTAA
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Protein sequence | MKIGTIVLGL IYIVQASAQT FNQNRRLIND AAALDPDNLN WDPHSKDALL IRDREIYTVG YASYSDNSMT LYQIETNSNS TDEIKEQIIC GINAVHSKHS EISVDKLHYI YHNSHLLQNR FRRREPYQES HEEGVLTVVL SYGSEEIGSA IKSIGSDVSF LTDPLNVNCA HGGAECPGNT RIVGFGGTCA DAVGTVNIAS YVDSSNTTVA QSKLNEGAEW ADHVIENNQS VGSWKVGFND SGLWNLIIRI IRNNECRNGL EPSYRIKSQR YMV
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