Gene PICST_29665 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_29665 
Symbol 
ID4837026 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp815021 
End bp815958 
Gene Length938 bp 
Protein Length273 aa 
Translation table12 
GC content42% 
IMG OID640388341 
Productpredicted protein 
Protein accessionXP_001382929 
Protein GI150864201 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAG GCACAATTGT CTTGGGGCTT ATCTACATAG TGCAAGCATC TGCACAGACC 
TTCAATCAGA ACAGGAGGCT TATAAATGAC GCTGCAGCAT TGGACCCAGA CAACTTGAAC
TGGGATCCTC ATAGCAAAGA CGCACTATTA ATACGTGATA GAGAAATTTA TACTGTCGGG
TATGCTTCTT ACAGCGACAA CAGTATGACT TTGTATCAAA TAGAAACCAA CTCTAATAGC
ACCGATGAGA TAAAAGAACA AATAATATGT GGTATAAACG CAGTGCATAG CAAACACAGC
GAGATTTCCG TAGACAAGCT CCACTATATT TACCATAATA GTCACTTGTT GCAGAATCGT
TTTAGAAGGA GAGAACCTTA CCAAGAGAGC CATGAAGAAG GAGTTCTTAC AGTTGTTTTG
TCATACGGCT CAGAAGAAAT CGGATCTGCT ATTAAGCTGA TCGGATCTGA CGTTTCATTT
CTAACGGACC CATTGAATGT TAATTGTGCT CATGGTGGTG CAGAGTGTCC TGGAAACACT
AGGATTGTTG GGTTTGGTGG TACTTGTGCT GACGCTGTCG GAACAGTAAA CATAGCCTCG
TATGTAGACA GTAGTAATAC TACAGTGGCC CAGTCGAAGT TGAATGAGGG AGCAGAATGG
GCCGACCACG TAATAGAGAA TAATCAGTCT GTGGGCTCAT GGAAAGTTGG CTTCAACGAC
TCTGGTTTGT GGAATTTAAT TATACGAATT ATTCGGAATA ATGAGTGTCG GAATGGTTTA
GAGCCTTGTA AGCTCGCTTC ACCAAGACGC TCATCGGTCA ATTATTGCCC ATCCTGGCGA
GTACTTGGCC TGGATATGCA AAATGCATTT TTTTTCTTGA ATTATAGTAC TTCTAATTAA
TAGCATACCG AATCAAGAGC CAGAGATACA TGGTGTAA
 
Protein sequence
MKIGTIVLGL IYIVQASAQT FNQNRRLIND AAALDPDNLN WDPHSKDALL IRDREIYTVG 
YASYSDNSMT LYQIETNSNS TDEIKEQIIC GINAVHSKHS EISVDKLHYI YHNSHLLQNR
FRRREPYQES HEEGVLTVVL SYGSEEIGSA IKSIGSDVSF LTDPLNVNCA HGGAECPGNT
RIVGFGGTCA DAVGTVNIAS YVDSSNTTVA QSKLNEGAEW ADHVIENNQS VGSWKVGFND
SGLWNLIIRI IRNNECRNGL EPSYRIKSQR YMV