Gene PICST_29640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_29640 
Symbol 
ID4837520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp757822 
End bp758481 
Gene Length660 bp 
Protein Length219 aa 
Translation table12 
GC content43% 
IMG OID640388835 
Productpredicted protein 
Protein accessionXP_001382913 
Protein GI150864189 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0837783 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAGGC AAAAGTTCAG AATTAACCTC AAGCTGGGGC AGACAGAAGA CTCCTATTTG 
AACAGCTCGT CTTCATCGTC TTTGAAGGAG TCAACCATAT CACGTTCTCG TTCCCGACTG
CCCCATAAGG AAAGAATATC ACAGTCATCC TCACCTCGCA AAGAAAGAAC AGGTTTCATA
ACTTCTGATT CTGGCTTGAA CTCATTGTCT ACACCTTTAA CTCCCAATAA TAAAGCATAC
CGTGAACGAT CTCCCGAGCG TTCAGCTGAG AAACTTCACA AATCAAGTTT ATATCATAAA
GATATCACTC TGGCGCAAGA TCTACCTTTG CTGAATACTT CGGCCAACAA CATCATTAAG
AACCCTGAGT TCCAAGATGA ACAGAACAGT AGAGGAAGGT CCAGGTCTCG AGATGGGTCA
CAAATAGGAT CTAATGTCAT TAACGTAAAC GACAACAAGA TAGTAGAAGA AGGAGAAGAT
GAAGATGAAG ATGACAATAG CATGATTAGC CTTATGGGAT TCAGCGGATT TGGTTCCACC
AAGGGAAAAC ATGTCAAGGC AGCAAAGGGT GGAGCCATCA AACAAGAGAA AAAGACAGAA
TACAGGCAAT ATATGAACAG GTCAAAGGGG TTCAACCGGC CGTTGTCCCC AGGAAGGTAA
 
Protein sequence
MDRQKFRINL KSGQTEDSYL NSSSSSSLKE STISRSRSRS PHKERISQSS SPRKERTGFI 
TSDSGLNSLS TPLTPNNKAY RERSPERSAE KLHKSSLYHK DITSAQDLPL SNTSANNIIK
NPEFQDEQNS RGRSRSRDGS QIGSNVINVN DNKIVEEGED EDEDDNSMIS LMGFSGFGST
KGKHVKAAKG GAIKQEKKTE YRQYMNRSKG FNRPLSPGR