Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_29640 |
Symbol | |
ID | 4837520 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | - |
Start bp | 757822 |
End bp | 758481 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 12 |
GC content | 43% |
IMG OID | 640388835 |
Product | predicted protein |
Protein accession | XP_001382913 |
Protein GI | 150864189 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0837783 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAGGC AAAAGTTCAG AATTAACCTC AAGCTGGGGC AGACAGAAGA CTCCTATTTG AACAGCTCGT CTTCATCGTC TTTGAAGGAG TCAACCATAT CACGTTCTCG TTCCCGACTG CCCCATAAGG AAAGAATATC ACAGTCATCC TCACCTCGCA AAGAAAGAAC AGGTTTCATA ACTTCTGATT CTGGCTTGAA CTCATTGTCT ACACCTTTAA CTCCCAATAA TAAAGCATAC CGTGAACGAT CTCCCGAGCG TTCAGCTGAG AAACTTCACA AATCAAGTTT ATATCATAAA GATATCACTC TGGCGCAAGA TCTACCTTTG CTGAATACTT CGGCCAACAA CATCATTAAG AACCCTGAGT TCCAAGATGA ACAGAACAGT AGAGGAAGGT CCAGGTCTCG AGATGGGTCA CAAATAGGAT CTAATGTCAT TAACGTAAAC GACAACAAGA TAGTAGAAGA AGGAGAAGAT GAAGATGAAG ATGACAATAG CATGATTAGC CTTATGGGAT TCAGCGGATT TGGTTCCACC AAGGGAAAAC ATGTCAAGGC AGCAAAGGGT GGAGCCATCA AACAAGAGAA AAAGACAGAA TACAGGCAAT ATATGAACAG GTCAAAGGGG TTCAACCGGC CGTTGTCCCC AGGAAGGTAA
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Protein sequence | MDRQKFRINL KSGQTEDSYL NSSSSSSLKE STISRSRSRS PHKERISQSS SPRKERTGFI TSDSGLNSLS TPLTPNNKAY RERSPERSAE KLHKSSLYHK DITSAQDLPL SNTSANNIIK NPEFQDEQNS RGRSRSRDGS QIGSNVINVN DNKIVEEGED EDEDDNSMIS LMGFSGFGST KGKHVKAAKG GAIKQEKKTE YRQYMNRSKG FNRPLSPGR
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