| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_29627 |
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| Symbol | SPF1.2 |
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| ID | 4836631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | - |
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| Start bp | 726842 |
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| End bp | 728206 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640387946 |
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| Product | PF1 P-type ATPase |
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| Protein accession | XP_001382904 |
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| Protein GI | 150864182 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0474] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCAACA TCATTGACAA CCCAGATATT GCAGGGGCTA AGTTGCTTGT TCGCACAAAA
GGATTTCTCA ACCGTTCTTT GTTATATCCA TATCTATGGC CAAAGCTAGC CCTAGTCCCA
GTTCTCTTTG ATGCCTACTT CTCTTACTGC TACGAGCATG TGGAAAACGG GGCATTTTTT
TATTTGATGA TGGTGAACAT GATAATTGCT AGCTGGATCC GGAAAATATT TATACTCGTT
TTTGTCTCCT GGGTATTTCG TCTTTGTTTC CCTGGATTTG ATTTCCATAA CTACTCCGCT
GTTAACACGA TTACGGAAGC CAGTCATATT AGGATTTTGA CCAGCCCAAA CCACAAAAGC
GGTAAAGTCT GTCCAATATT CAGAAAAAAG TTCCATGATG GCGAAGAACA GGTTTTATTT
TTGTACCAGA GACGTCACTA TTTGCTCAAT GTTAAGACCC AGAGGTTTTC ACCTCCTGCC
TTCCTCTTTG ATGAAGAGCC TGAATTGGCC AATTTCCAGA GCTCGACAGG GCTCCTGGGT
GACTTGGAAA AGCTTGTAAG AAACTACGGT AAGAACAAGT TTGATATACC AGTTCCTACC
TTCAAGGACT TGCTCCAGGA GCCTACCATT GCTCACGCCT TGGAGTTCGT AGCTTTCGGT
GGAGCTCTTT CGATTTTGAA TAAGATGTGG TACCGCTCAT TGTTGTTGCT CGTTGTGCTT
GTTTTGGTCG AGATGACTAC CTTGTTCCAG AGAAGAGCCG CCTTTGCTAA AATCCAGGAA
ATGGAAGTTA CACCTTACAC TATCTACACA TATAGAGATG GCAAATGGAA GCAGTTGAAG
ACCACTGAAT TGCTTCCTGG TGATTTGGTT TCTGTCACCA GAACTAGCGA TGACTCTACG
CTTCCCTGTG ATTTACTCTT AACAGATGGT GCCGCCATCG TTAACGAAGC CATGTTGTCA
GGCGAGTATA CACCTTTGTT TAAGGAGTCG ATCAAGTTAA GGCCCAGTGC TGAAAAGTTG
CAACCAGAGG GTTTGGACAA GAACTCAATT TTGCATGGTG GTTCCTTTGT CTTACGAGTG
ACCAAGCCAG AAAACCCAAT TATTCCCATT GCTCCCGATA ACGGAGCTCT TGCCTATGTG
ACCAAAACTG GCTTTGAGAC CTCGCAAGGT TGTTTGGTTC GTAGGAAGAT TCTCTCCACT
GAACAAGACA CACCAGGCAT TATTGAAGTT TTTCTTCTCA TCTTGTTAAT CTTACATGAC
TTTGAACCTC ATAAATGGTA CGAAGATAGT AAAGGAATGA TTTCACTTTT CGGGAAGATA
ATACATTCCA CTCTGGAATC ATTAGGGCTC GGCAATGAAA AGTAG
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| Protein sequence | MSNIIDNPDI AGAKLLVRTK GFLNRSLLYP YLWPKLALVP VLFDAYFSYC YEHVENGAFF
YLMMVNMIIA SWIRKIFILV FVSWVFRLCF PGFDFHNYSA VNTITEASHI RILTSPNHKS
GKVCPIFRKK FHDGEEQVLF LYQRRHYLLN VKTQRFSPPA FLFDEEPELA NFQSSTGLSG
DLEKLVRNYG KNKFDIPVPT FKDLLQEPTI AHALEFVAFG GALSILNKMW YRSLLLLVVL
VLVEMTTLFQ RRAAFAKIQE MEVTPYTIYT YRDGKWKQLK TTELLPGDLV SVTRTSDDST
LPCDLLLTDG AAIVNEAMLS GEYTPLFKES IKLRPSAEKL QPEGLDKNSI LHGGSFVLRV
TKPENPIIPI APDNGALAYV TKTGFETSQG CLVRRKILST EQDTPGIIEV FLLILLILHD
FEPHKWYEDS KGMISLFGKI IHSTSESLGL GNEK
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