Gene PICST_29603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_29603 
Symbol 
ID4837580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp664807 
End bp665715 
Gene Length909 bp 
Protein Length302 aa 
Translation table12 
GC content39% 
IMG OID640388895 
Productpredicted protein 
Protein accessionXP_001382369 
Protein GI150863776 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTCG AAGAATTGGC CAGAACGGCT GAAAATTCAC TACTTTGGGA CTTGTACTAC 
ATGACATTGG GATATCTCAT TACAACCAAC GAGAACCATA CTTTGATACG GTTGCATGAG
GTAGTAGTCT ATGAGTTATA TAGCCGTGAA GGTGATATAT TCATAGAGAA AGAGTTTGAA
ATAATCACAA CTTTCCTATC AAGTAGATTC AAACGAATCA ACAAAAGTTC ATCACTCTGG
TTCTGGACAA AGAAACTAAC TATCATATTG ATTTTGCAGA GGTTCGTCGA AGGGAAAGAT
GTTAGAGCAT TCCATGAATG TCTTGTGGAT AGAACATTCA AGAGTTGTCA GTTTCATTTT
GCAAACTACT ATGCTTGCAA CTTCTTGCGG TGGTATTTGG CGATGTTGGC GATTGTAGAA
GATACTGAAA GGGTACGATC TATAGAGGAT CAAGTGTTGA CTTCTTGTCA CCAGAATTTC
AGAGACGTTT CGCTCTGGGG ACTATTGGAA ACATTAATAA CTAGAGGAAG CAAACTGTTG
GAGTTTATGG CTCTTCATTA CAATACTATT GTCCAGAGTT TACCAACAAA GGATGGACGC
AGTTATCCAG AGTTTGCTGC TACTGATAAA CAAGCAGCGG AACCGTATAA CATAAATATA
GAACACGAGA TTAGCTGGCT TCTCAGTGCA GATTGTTCAT TTCGAACTCC ATATGTCAGT
CTTTTGAGAC CGTTTGAACC CAATGGGAAC AGGGAAGTCT GGAGGCGAAT CGAGTCTCTC
TTGGTGACAA AGTTAGAAGA CGAATCAGAA CAGTTGGCCC GGTTTGAAGA CCATTCTAGT
GAGCACTACA GGAAAAAGAA GGAATTGTAC GAGACTCTTG ATTATGTTAT AGAAGAGTAT
TTTGAATAA
 
Protein sequence
MDFEELARTA ENSLLWDLYY MTLGYLITTN ENHTLIRLHE VVVYELYSRE GDIFIEKEFE 
IITTFLSSRF KRINKSSSLW FWTKKLTIIL ILQRFVEGKD VRAFHECLVD RTFKSCQFHF
ANYYACNFLR WYLAMLAIVE DTERVRSIED QVLTSCHQNF RDVSLWGLLE TLITRGSKSL
EFMALHYNTI VQSLPTKDGR SYPEFAATDK QAAEPYNINI EHEISWLLSA DCSFRTPYVS
LLRPFEPNGN REVWRRIESL LVTKLEDESE QLARFEDHSS EHYRKKKELY ETLDYVIEEY
FE