Gene PICST_29596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_29596 
Symbol 
ID4836764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp653766 
End bp654329 
Gene Length564 bp 
Protein Length187 aa 
Translation table12 
GC content42% 
IMG OID640388079 
Productpredicted protein 
Protein accessionXP_001382365 
Protein GI126131680 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAAGT CGGTAAAAGT TAAGGAAACT TCTGAAGTTC CAGACAACTG GAGCGAACAG 
TTGGAAGAAG TAGCACATGA AGCGTCTCGA TGTAACAAGA TTCTATCTTC GTATCCAGTA
GAAGTAGTTC ATTCCAACGA ATACGCAATT TCAGATGAAC CCGAGCCAGA AGAATCAGAA
GAACCAGAAA TGCCAGAAGA CTCTGGAAGT GGGGAGTTTG TCTTCTCTGA AGCGTTACGA
CATCTCCTCC AGTGGAACTC CACCACTAGC GAAACAACAT CTCTTCTTCC CTTGTATCCT
ATATCAGGTT CTCAGATTCA GAGATCGTAC ATCGAATCTT TGTTGGAGAT TGTATGGAGA
TATCTCGCTA CCAGAGCCAT GCGGAGGTTT TTCAGAAGGT ACAAGACAAC TGTGATAATT
GTTTCCATCG TTATTGCAAC TGCTGTTGTT GTCTTGCTTT TCTATACTAG TCAATGGAAA
AACGTCGTGA GGTTTCTACA ATTGGTAGTC TGTTACTTTC TCGAACAGTA TGGTCAGAGT
CCACAGTTCT GTCAAACGTC TTGA
 
Protein sequence
MSKSVKVKET SEVPDNWSEQ LEEVAHEASR CNKILSSYPV EVVHSNEYAI SDEPEPEESE 
EPEMPEDSGS GEFVFSEALR HLLQWNSTTS ETTSLLPLYP ISGSQIQRSY IESLLEIVWR
YLATRAMRRF FRRYKTTVII VSIVIATAVV VLLFYTSQWK NVVRFLQLVV CYFLEQYGQS
PQFCQTS