| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_29591 |
|---|
| Symbol | |
|---|
| ID | 4837204 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009042 |
|---|
| Strand | - |
|---|
| Start bp | 641620 |
|---|
| End bp | 642693 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640388519 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001382885 |
|---|
| Protein GI | 150864167 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.374721 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.109445 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAAG AAGATAACTT TATCGACCCT AACAGCGAAG TTGGGAAGCA ATTGCAGAAA
CTCAAAGATG AGTTCAAGCA AGAGCTATTG GTTCAAAGCG CCAAGTATGA CGCGTTGATG
GAAGCTATGA AAGCTCAAAG CTCCTCTGGC GTACCTCCAC CCCAGATAAA CAAACTGGAG
GATCGGAATG AAGAAATAAG GAAGGATGCG AAGAAAGATT CAGAGCTAGC AGCAACAGCC
TTCAAAGGAA TTGTTCCGCT TGCGAGAAAT ATTGACGCTA TTACCAAATG GGAAAAAGCC
TTCTTAAAAC TCTTCCGAAG ATACGGTGGC TTACAGAAAA TATGGGATGA AGACTTAGGA
CATGATTCTA AAGACTTCAA TATTAAGAAC ATCCCATGGC ATGGTAAAGA ATTGGAAACA
TTCATACACA GATTGTCCGA TGAATTGATA TCCAGAATAA TTGATATTAA TGAAAAGGCA
TTCTCTGAGA TAGATGAAGT GAATTACGAA ACAGATTTAA AGACTATGTA TATCTTTGTA
AAGACTTACA AGATGGAGAA CCTTCCACAT AGAATTGGAC AGGTATTGAC TTACCTTAGG
TACACTGGAG ATTTTAGAAC GGATACCGAC AGAGCTGTTG ATGGCCTTCT GCACATAAAA
CAATGGGTTG AAGGTACCAA CGAAGAAATT CTAGATTTCT TGTGCAAGAT GAAACTATAT
TACATCATTG TATTTGATAG GTACCTAAAC GAAGTCGAAA CACGCAACAT GTTTTATAAA
TCTCTTGCTT GGTTCTTTCA GGAACACAAA AAGGATGGTA AAACACCAAC AATTGATGAC
GTTATCCAGC GCATGAGAAA CCATCACGAC TACGAGCCAC CAGACTCTCT GGACAAAAGA
ACAATCGAAA GCTTGATAAG CGAAAGGATT AAAAACGCCC AAGAGAGGGA AAAGACCAAA
TCCAATGGAA ATAGAGGAAG CTTTGCAAAA TCCCACACCA CAGGTGAATC ACACGATGGT
AATAAGCTGG GATTCAAGGG CAAAACCTCC GGTGCTAAAC GCCACGGGCA ATAA
|
|---|
| Protein sequence | MAKEDNFIDP NSEVGKQLQK LKDEFKQELL VQSAKYDALM EAMKAQSSSG VPPPQINKSE
DRNEEIRKDA KKDSELAATA FKGIVPLARN IDAITKWEKA FLKLFRRYGG LQKIWDEDLG
HDSKDFNIKN IPWHGKELET FIHRLSDELI SRIIDINEKA FSEIDEVNYE TDLKTMYIFV
KTYKMENLPH RIGQVLTYLR YTGDFRTDTD RAVDGLSHIK QWVEGTNEEI LDFLCKMKLY
YIIVFDRYLN EVETRNMFYK SLAWFFQEHK KDGKTPTIDD VIQRMRNHHD YEPPDSSDKR
TIESLISERI KNAQEREKTK SNGNRGSFAK SHTTGESHDG NKSGFKGKTS GAKRHGQ
|
|---|
| |