Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_29588 |
Symbol | |
ID | 4837034 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | - |
Start bp | 633139 |
End bp | 633789 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 12 |
GC content | 40% |
IMG OID | 640388349 |
Product | predicted protein |
Protein accession | XP_001382883 |
Protein GI | 150864165 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00486066 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGTGGTGA CTACTAGAAG CAGATCGGCC AAGGTTCCTA CCAAGATAAA ATTTCTGGAA GCCGACAACA GTTTAAATGA AGTTGAATAC CACACAGCAG AGGAAAATGA AGAGGAAGAG GAAGAGTCCA GTTCAGAGGA CTCTGACGAT GATGCTCCAG AGGAAGAATC ATTAAGTACA GCCAAGCAAG ACATAATAAA TAAGCAAAAG AAACAAAAGG AATTAGAGGC ACAAAGAAGA AAAGAAGAAA GAGAAAGGCG GAGAGAATTA GACCTCAAAA ACAAGGAACA GAAACTGAAG AAGAAAGAAA GAGAACAACC ACAACAAGAA GAAAACGAAT TGCCTGATTT CTTACCTGAC GATTTGATAG AGGCAATCGA AAATGATGGC CTCTTAGCTG CCCATACCCA ATCAAAGCAT TTGAAGGTCC AGGACTTCGA AGAAATGGAC CAAAAGTTAT TGCGCCAGAA AATCAAGCAA GAGAAGTTGA GAGCAATCAA GTTGTCGAAA AAGTTGTCTG TTAATAAGGG ACCTGTTCAA GTCAAGGTAC AGAGTTTTAA CAGCAACAAG AAATTAGTTC CAAAGTCTGA ATCTAGGATC GTCAAGTCCA AGGACAAGTG GTTGAAGAGA AAGTCTCTCA ACAGAAAGTA A
|
Protein sequence | MVVTTRSRSA KVPTKIKFSE ADNSLNEVEY HTAEENEEEE EESSSEDSDD DAPEEESLST AKQDIINKQK KQKELEAQRR KEERERRREL DLKNKEQKSK KKEREQPQQE ENELPDFLPD DLIEAIENDG LLAAHTQSKH LKVQDFEEMD QKLLRQKIKQ EKLRAIKLSK KLSVNKGPVQ VKVQSFNSNK KLVPKSESRI VKSKDKWLKR KSLNRK
|
| |