Gene PICST_29588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_29588 
Symbol 
ID4837034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp633139 
End bp633789 
Gene Length651 bp 
Protein Length216 aa 
Translation table12 
GC content40% 
IMG OID640388349 
Productpredicted protein 
Protein accessionXP_001382883 
Protein GI150864165 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00486066 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTGGTGA CTACTAGAAG CAGATCGGCC AAGGTTCCTA CCAAGATAAA ATTTCTGGAA 
GCCGACAACA GTTTAAATGA AGTTGAATAC CACACAGCAG AGGAAAATGA AGAGGAAGAG
GAAGAGTCCA GTTCAGAGGA CTCTGACGAT GATGCTCCAG AGGAAGAATC ATTAAGTACA
GCCAAGCAAG ACATAATAAA TAAGCAAAAG AAACAAAAGG AATTAGAGGC ACAAAGAAGA
AAAGAAGAAA GAGAAAGGCG GAGAGAATTA GACCTCAAAA ACAAGGAACA GAAACTGAAG
AAGAAAGAAA GAGAACAACC ACAACAAGAA GAAAACGAAT TGCCTGATTT CTTACCTGAC
GATTTGATAG AGGCAATCGA AAATGATGGC CTCTTAGCTG CCCATACCCA ATCAAAGCAT
TTGAAGGTCC AGGACTTCGA AGAAATGGAC CAAAAGTTAT TGCGCCAGAA AATCAAGCAA
GAGAAGTTGA GAGCAATCAA GTTGTCGAAA AAGTTGTCTG TTAATAAGGG ACCTGTTCAA
GTCAAGGTAC AGAGTTTTAA CAGCAACAAG AAATTAGTTC CAAAGTCTGA ATCTAGGATC
GTCAAGTCCA AGGACAAGTG GTTGAAGAGA AAGTCTCTCA ACAGAAAGTA A
 
Protein sequence
MVVTTRSRSA KVPTKIKFSE ADNSLNEVEY HTAEENEEEE EESSSEDSDD DAPEEESLST 
AKQDIINKQK KQKELEAQRR KEERERRREL DLKNKEQKSK KKEREQPQQE ENELPDFLPD
DLIEAIENDG LLAAHTQSKH LKVQDFEEMD QKLLRQKIKQ EKLRAIKLSK KLSVNKGPVQ
VKVQSFNSNK KLVPKSESRI VKSKDKWLKR KSLNRK