Gene PICST_29587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_29587 
Symbol 
ID4837488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp631618 
End bp632403 
Gene Length786 bp 
Protein Length261 aa 
Translation table12 
GC content44% 
IMG OID640388803 
Productpredicted protein 
Protein accessionXP_001382361 
Protein GI150863770 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0263058 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATGA GCAGACATTT CGAATACTCC AACTACCAGA TCTCGCAGAT TCACACCACC 
ACCATCACTG TACCTTCCAG CGTTCACCGG CCCTTGTGTG CTTCTTCTGC AGATGACAAT
AAGATATGTC AGTGGTACTG CTGTTCTTGT GGCCAAAGCT ACGGATCAAT ACATTATAAT
CACAACGAAG AAAAGAGTAA AGAGACCAGC AATGAGAGCC ACAATCCTAT AGAACAAGAT
CTTATTGGTA ATGAAAATCA ATATCATAGC AACATTAATA TCAATATCGA TACTCCATCT
GGTATATCAA CGAACAGCTC TGTTGAATCT CCATTTCTCA ACTCACCAAC CCTTAATGTT
CAGGATTTCA GATACTACGG CCAGATGGGT CACAGCAACT CCTTGGAACC GAGTCGCTCG
GAATCGAATT TAAGTGGCAG CAGTGTGACC GAGTCTTCTT CTCCCAAAAC TTGCAACTAC
GATTTCTACA GTCCTTCCCT TTCACAAAGA CACATGGATA ATGAGAATGC GCCATTGACT
CTTACCAGAT CAAAGAGTTT GGGAGACTTG CTAGAAGACA AATATGAACA ATCACAAACT
ACGATACCCG GCTCTCGAGA TCCTCTGCAT CTCCATCCAA CAGAAAACGA CCACGACAAC
TACAACCAGA GAAGTGTGCG AGGTTGCGAG ATCATTCTCA ACATCCCCAC CAGATTCACC
TGTCACAGAT GTAACCACAT GATGTGTCCA TATTGTCCCA AAGTTCGCTT GAGAGACTTG
GAATAA
 
Protein sequence
MAMSRHFEYS NYQISQIHTT TITVPSSVHR PLCASSADDN KICQWYCCSC GQSYGSIHYN 
HNEEKSKETS NESHNPIEQD LIGNENQYHS NININIDTPS GISTNSSVES PFLNSPTLNV
QDFRYYGQMG HSNSLEPSRS ESNLSGSSVT ESSSPKTCNY DFYSPSLSQR HMDNENAPLT
LTRSKSLGDL LEDKYEQSQT TIPGSRDPSH LHPTENDHDN YNQRSVRGCE IILNIPTRFT
CHRCNHMMCP YCPKVRLRDL E