Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_29587 |
Symbol | |
ID | 4837488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | + |
Start bp | 631618 |
End bp | 632403 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 12 |
GC content | 44% |
IMG OID | 640388803 |
Product | predicted protein |
Protein accession | XP_001382361 |
Protein GI | 150863770 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0263058 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAATGA GCAGACATTT CGAATACTCC AACTACCAGA TCTCGCAGAT TCACACCACC ACCATCACTG TACCTTCCAG CGTTCACCGG CCCTTGTGTG CTTCTTCTGC AGATGACAAT AAGATATGTC AGTGGTACTG CTGTTCTTGT GGCCAAAGCT ACGGATCAAT ACATTATAAT CACAACGAAG AAAAGAGTAA AGAGACCAGC AATGAGAGCC ACAATCCTAT AGAACAAGAT CTTATTGGTA ATGAAAATCA ATATCATAGC AACATTAATA TCAATATCGA TACTCCATCT GGTATATCAA CGAACAGCTC TGTTGAATCT CCATTTCTCA ACTCACCAAC CCTTAATGTT CAGGATTTCA GATACTACGG CCAGATGGGT CACAGCAACT CCTTGGAACC GAGTCGCTCG GAATCGAATT TAAGTGGCAG CAGTGTGACC GAGTCTTCTT CTCCCAAAAC TTGCAACTAC GATTTCTACA GTCCTTCCCT TTCACAAAGA CACATGGATA ATGAGAATGC GCCATTGACT CTTACCAGAT CAAAGAGTTT GGGAGACTTG CTAGAAGACA AATATGAACA ATCACAAACT ACGATACCCG GCTCTCGAGA TCCTCTGCAT CTCCATCCAA CAGAAAACGA CCACGACAAC TACAACCAGA GAAGTGTGCG AGGTTGCGAG ATCATTCTCA ACATCCCCAC CAGATTCACC TGTCACAGAT GTAACCACAT GATGTGTCCA TATTGTCCCA AAGTTCGCTT GAGAGACTTG GAATAA
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Protein sequence | MAMSRHFEYS NYQISQIHTT TITVPSSVHR PLCASSADDN KICQWYCCSC GQSYGSIHYN HNEEKSKETS NESHNPIEQD LIGNENQYHS NININIDTPS GISTNSSVES PFLNSPTLNV QDFRYYGQMG HSNSLEPSRS ESNLSGSSVT ESSSPKTCNY DFYSPSLSQR HMDNENAPLT LTRSKSLGDL LEDKYEQSQT TIPGSRDPSH LHPTENDHDN YNQRSVRGCE IILNIPTRFT CHRCNHMMCP YCPKVRLRDL E
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