| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_29579 |
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| Symbol | |
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| ID | 4837158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | - |
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| Start bp | 610014 |
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| End bp | 613070 |
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| Gene Length | 3057 bp |
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| Protein Length | 1018 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640388473 |
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| Product | predicted protein |
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| Protein accession | XP_001382881 |
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| Protein GI | 150864164 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5160] Protease, Ulp1 family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.198917 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTCCG AGCGTTCGAG TCTTCACTCG AAGGACTTTC GGTCGCTCAC CAGTCGCCCC
AAGACGGTCC AAATCAAGTC CGGAACTTCT GGATCCGGCA GCACTTCACT TATAACCTCG
AGTCATCTTG GGGGAGGCAT CAAGCCCATG AACAAACTCA CAGACAAGTC CCGCATCTCT
CCAAGAAGTC ATCTTGTGAC AAGACGAAGC CCAACATCGC CTAAATCCCC ACTAGCCAAA
GAGTTGCTGA GCAAATTGCA CCGAGCATCG GCCATCAGAG GTAAGCTCGA TCAACTCTCA
CATTCAAAAT CAAATTCTCA TTATACTTCA AATTCTCACA TAAGTAGCTC TCATTCAATT
TTTGCACAAA CAAAAACAAA GCCAGTCCGT ATTCCCAGTC CAAGAACTGT AGGAATACCA
AGAGATGACG CAATTCAGGT TTCTGCTGTG AATTTGCCGT TGGAAAAGTC TGAATCTGAA
TCTACAAATG TAATTAGTAG TGATAAGAAT ATTAGTGCTA AGAGTTCGCC TGATTCTAAC
AAACAGTTAC CGCAACTCAG AGATATATTC GGCAATGTGG TTAATCGTAG CTCCAGTCTG
ATAGACGAGA AGCCGCGAGT TACTATGAGT TTGTCTTCAC TAGAAATAGA AGGTCAGGAT
GAAGCTCTGC ACTTAGTAAA GTTGCATATC TCTGCCAACA ACGAGTATAT CTTTCTCACA
CGTTATGGCA AGATCGTAGA ATTCAGTGTA ATTCATGGCG AAGACCAGCT TCAATGGATC
AAGTTTGCTG AATATGCAGT TGTACTCCGT ATCGCTGGCA CTGGCAGCTA TTGGATAGCC
AACCACGACT TGGAAGATGA CGAGTTCAGA GACAATTTTC GCCAGCACCA GCGGTGGAAC
GTACAACCCG ACGTAACAAT GACGAGGGAT GATCTAGACA TAGTGCGGAC GAATATGGCC
AACAATGCCA ATAAAAAGCA GCCTGGTAGA TTGAGCTCGT TGTTCAACAT TAACAAGATT
TCACCCAAGA AGTTCTTTGG TGATGGACAA CGAGCTACGA GATCAAAAAC CAGTGATCAT
TTTGATTTCA AGCGATTGGA TCAGTCTGAG AATAGCGAAA GTTTGCAAAA AGTTCAAGTT
CCCGTTATTC GAGAGACTCC GAAGTCGTTT TCACCAGACT TGCAATACAC CTTTGCCAAC
AATAACGTAT TCAAAATAGC TTATTCTGAC TTCAAGACAC TCTACAACAA TGAATGGATC
AATGATACCA TCATTGACTT CTTTATTCAA TATGAAATCG ACAGAGCTAT CAAAGAACGC
CGTGTGCGAG AGAACGAAGT CTATGCATTC AACTCATTTT TCTTCACTAA GTTGATGTCC
AAATCTGCCA CTCAAGATTC GCCTGATTAC TACGGTAATA TCAAGCGATG GCTCAGTAAA
GTCGACCTCA TGTCATATCC ATATGTCATT ATCCCTATCA ACGAACATGC CCATTGGTAC
TGTTCCATCA TAAGAGGATT ACCTGAGTTG TTAAAAGGAG CGCAAAATCA GAAGGCCACT
ATTCAAGTTC CCGATAGTCA GGAAGACGAA CAAGACTCTG TAGACTCTTC TGGCAGTTCA
CAGGAGCCAT CTGAAGTAGG TGGTGTAAGC CACTCGGCAA ACTCGCACAT AGACTTTGAT
GAAGAACCTG TAGACGCCAA AGCCGTCCCA ACTTCCCGGG CAGAGATCTT TGTTTTCGAC
TCGTTGGGTC AACAGCACAA CCAAATCAAA GTTCCTTTGA AACGGTTCAT CATAGACTAT
TGCAAGGAAA AATATAATGT AGACATAGTC AAGGCTCAGA TCAGGGTCGT AACAGCTAAA
GTGCCCAAAC AGAACAACTT CAATGATTGT GGAATACATG TGATCTACAA CGTCCGAAAA
TGGCTAGGAG ATATTTCTCT TTGTGAGAAA TTATGGAGAG GTTCGTATCT GACCCGTACG
GCACGGTCGT TGTTTTTGGC CGAAGAAAGA AACGGTATGA GAAAGCAGTT GATTACTAAA
TTGCTTGAGT TACACAAGGA TAGAATTGTA GGCGAGAGTG ACTTGCTGGA CGAAGTAAAT
CAAGATGCGC TCTCAGACGA TGATTTGGAG GTGATAGAGT TCCATGCTAA CGACAGAGAT
GCCAGAGCAG CCAGAGCAGC AAACAGAGCA GACAATGCCG ATAAAGGAGG TAATGTCAAC
AAAGGAGGAA ATGTCGACAA AGGAGGAAAT GTAGACAAAG GAGGTAATGT CGACAAAGGA
AGTAATGTAG AAGTTAGAAG TGTAAGAGAT AAAACTGAGA ATAGTACTGA TGGCAAAGTT
AGTGTTAATT CTTCAATCGG CGCACTTTCT TCAATCGATG TCAATTCTTC TAATGAGTAT
CCCAACACTT TAGATCCTCG GTCGTTCCTG AAACAGTCTC CTTCTAATGG GGAGCTGATG
ATCAATGATA GTCTCCGGAA ACATTTCTCA ACCGATGTGT TGCCTACATT TGTCATTCGT
TTTCTCAACG AGAACTTCAA CAAGAAGAAC AGAGAACTCG ATAGCACCAT ACTTGCTATA
ATTTCTCGCG AAATTCGTAG CTTAAAGCAC TTGGAAGAAC AAGACAAAAG AGTAGCATCT
TCATTCCAGA AGGTATTGAC AGCCATCGAT GAATACCGTG TCCCTGAAAA CGAGGCTATT
CGGCCAAAGA ATAAGGAGTT TAAAATCCAG GATAGCTACG TAGAAGACAG CATTCAAAGA
GGAGCTATTC TGTCACCTTC GCTCTACGAC TCAGACGATA TCAACGAGAG TGTTTCTCAA
TTGGCGATTT CAACCAAATC TCCCCAAACG CCTAGAAGAG TGCAAACTAC TCCATTGAAG
GTAACAGACT CAATATCAGA AGTGATTGAG GCAGTCCCGC AAGTCATTGA GGACGTTAGT
TCGGCCGCTT CTTCGGATCT AGAGATTGTT TCAGATGGGG AGTTATCGCC AGCGATTCGT
TCGAAGCTGA AGTTGCCCAC AAAGGAAATA GTAAGCAAAC GTCGCAAATT GAAGTAG
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| Protein sequence | MSSERSSLHS KDFRSLTSRP KTVQIKSGTS GSGSTSLITS SHLGGGIKPM NKLTDKSRIS
PRSHLVTRRS PTSPKSPLAK ELSSKLHRAS AIRGKLDQLS HSKSNSHYTS NSHISSSHSI
FAQTKTKPVR IPSPRTVGIP RDDAIQVSAV NLPLEKSESE STNVISSDKN ISAKSSPDSN
KQLPQLRDIF GNVVNRSSSS IDEKPRVTMS LSSLEIEGQD EASHLVKLHI SANNEYIFLT
RYGKIVEFSV IHGEDQLQWI KFAEYAVVLR IAGTGSYWIA NHDLEDDEFR DNFRQHQRWN
VQPDVTMTRD DLDIVRTNMA NNANKKQPGR LSSLFNINKI SPKKFFGDGQ RATRSKTSDH
FDFKRLDQSE NSESLQKVQV PVIRETPKSF SPDLQYTFAN NNVFKIAYSD FKTLYNNEWI
NDTIIDFFIQ YEIDRAIKER RVRENEVYAF NSFFFTKLMS KSATQDSPDY YGNIKRWLSK
VDLMSYPYVI IPINEHAHWY CSIIRGLPEL LKGAQNQKAT IQVPDSQEDE QDSVDSSGSS
QEPSEVGGVS HSANSHIDFD EEPVDAKAVP TSRAEIFVFD SLGQQHNQIK VPLKRFIIDY
CKEKYNVDIV KAQIRVVTAK VPKQNNFNDC GIHVIYNVRK WLGDISLCEK LWRGSYSTRT
ARSLFLAEER NGMRKQLITK LLELHKDRIV GESDLSDEVN QDALSDDDLE VIEFHANDRD
ARAARAANRA DNADKGGNVN KGGNVDKGGN VDKGGNVDKG SNVEVRSVRD KTENSTDGKV
SVNSSIGALS SIDVNSSNEY PNTLDPRSFS KQSPSNGESM INDSLRKHFS TDVLPTFVIR
FLNENFNKKN RELDSTILAI ISREIRSLKH LEEQDKRVAS SFQKVLTAID EYRVPENEAI
RPKNKEFKIQ DSYVEDSIQR GAISSPSLYD SDDINESVSQ LAISTKSPQT PRRVQTTPLK
VTDSISEVIE AVPQVIEDVS SAASSDLEIV SDGELSPAIR SKSKLPTKEI VSKRRKLK
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