| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_29573 |
|---|
| Symbol | |
|---|
| ID | 4837276 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009042 |
|---|
| Strand | - |
|---|
| Start bp | 594209 |
|---|
| End bp | 594877 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640388591 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001382876 |
|---|
| Protein GI | 126132702 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.566988 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.797019 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGGC TCAGCAACTT GAATAAGCAG TACTTGACAT ACTTGGTAAA GTATCCGCTT
TTGACCAAAG CCGTCACCGC CGGTGTGTTT TCTGGATTGA GCGAAATCGT CTCTTCAGGA
ATCACCAATG AGTTCAAGGA GACAGTTGTG TTTGGCAAGT ACAAGGTCAA GCACTTCTTC
ACCCGGAAGT TGTTAACTAT GATTATCTAC GGGTCTTTGA TTGCTACACC TATTTCCCAC
AATTTGTACG AAATCATAAA TAACAAGCTC TTTGTTGGCA CCTTGACTAC TAAGGGCAAG
ATCTTGAAGA TATTGACTTC GTTGTCCACG GTGACTCCAC TTTTGTCTGC CTGCTTCACT
GCTTGGATAG CGTTGATTAA CAATTATGAA ATTGGAAAGG AGTTTTCTCC ATGCACTGAA
ATCAAGAAAA TCATTGCTAT CGCCAAGGCA GGGTTGAAGA AGGGTTACAC TACCGTGTTG
AAGTCGTCAC TCGTGACCTC GTTCTTCTCG TTAATCGTTG CCCAGAAGTT CATTCCTCCA
CAATTGTGGG TTGTGTTCTT CAACTTGGTA TATTTCGTCT TGGGAACTTA CCAGAACACC
AAGTTGAAGT TGGCTCAGAA GAAACTCAGA TTACAACAAG AGAAGGAGCA AGAGAAGAAG
GAGGAATAA
|
|---|
| Protein sequence | MSGLSNLNKQ YLTYLVKYPL LTKAVTAGVF SGLSEIVSSG ITNEFKETVV FGKYKVKHFF
TRKLLTMIIY GSLIATPISH NLYEIINNKL FVGTLTTKGK ILKILTSLST VTPLLSACFT
AWIALINNYE IGKEFSPCTE IKKIIAIAKA GLKKGYTTVL KSSLVTSFFS LIVAQKFIPP
QLWVVFFNLV YFVLGTYQNT KLKLAQKKLR LQQEKEQEKK EE
|
|---|
| |