Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_29560 |
Symbol | |
ID | 4836703 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | + |
Start bp | 564213 |
End bp | 565094 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 12 |
GC content | 40% |
IMG OID | 640388018 |
Product | predicted protein |
Protein accession | XP_001382345 |
Protein GI | 150863763 |
COG category | [R] General function prediction only |
COG ID | [COG5271] AAA ATPase containing von Willebrand factor type A (vWA) domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.820311 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTATAT CCATTTCCGT TACATCAACT TCCGTCATCA AGGAAGCCCC CGTATCTGCT GACCATGTCA TCAAACTATT GCAGGACAAG TATGGAAAGG GCGAAGCAAT TGACGCTAAG AAACTCTCAG AATACATTTT GGAGGATATT CAGCAGAGGT CCTCGAAACA CAAATTCATA GTTCAGGCTA CAAAACTAGA GGCAGATGAT GGTGTAGATG CAGACTTGCT TATTGCGTCC AGTTTTGGAG CTGTGTGGGA AGCTGAAAGA GACGGTTATA TCAGTCTTAA AATCGTCTCG AATGAGGCAG AAGCTGAAGA GAAGTCTGAG AAGGTAGAAA AGATAGAAGA AAATAAACCA GAGATAGCGG AAACTGAACA TGAAGAACTG AAAGTTGAAG GAGGAGAAGT AGATAAGGAA GGTGAAGTAG ATAAGGAAGG TGAAGTAGAC AAGGAAGGTG AAGTAGACAA GGAAGGTGAA GTAGACAAGG AAGGTGAAGT AGACAAGGAT GATAAAGGAG ATAAGGAAGA TGAAGATGTG GAAGAAGATA AGGAAGCTGA GGTAGGAAAC GAAGATGTGA AGGAAACTGA AGAGAAAGAA GAAGCAATTA AGGAAGAGAA AGAAGTGGAG CAAGAAATTA AAGAAGATAA AGAAGAGGAA AGAGAGGAAG AAAACGAAGG AGACAAACAA GGAGAAAATG AAGTCAAAGA ATACAGGCAC ATTGAAAATG AAGAGAATCA AGAAGTTCTA AAGCATACTG AAGAATTGGA ATCTGAAGGG CCTATAAAGG AAGAAGTTTC TCTTACTCCT GATGAGAAAC AACAAGTCAA GACGCCATTG AAAACTACGT TAGTATCATT ATTCTGGATA TATGTCAATT AG
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Protein sequence | MSISISVTST SVIKEAPVSA DHVIKLLQDK YGKGEAIDAK KLSEYILEDI QQRSSKHKFI VQATKLEADD GVDADLLIAS SFGAVWEAER DGYISLKIVS NEAEAEEKSE KVEKIEENKP EIAETEHEES KVEGGEVDKE GEVDKEGEVD KEGEVDKEGE VDKEGEVDKD DKGDKEDEDV EEDKEAEVGN EDVKETEEKE EAIKEEKEVE QEIKEDKEEE REEENEGDKQ GENEVKEYRH IENEENQEVL KHTEELESEG PIKEEVSLTP DEKQQVKTPL KTTLVSLFWI YVN
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