| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_29525 |
|---|
| Symbol | |
|---|
| ID | 4837547 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009042 |
|---|
| Strand | + |
|---|
| Start bp | 487416 |
|---|
| End bp | 489737 |
|---|
| Gene Length | 2322 bp |
|---|
| Protein Length | 773 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640388862 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001382330 |
|---|
| Protein GI | 150863754 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.197874 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGACAA TCTTGAAAAT AACACTGCTG GTGGTTGGTC CGACTGCTAA CCATAGTTTC
AGCTATTGCG TCCGACATAG CGTACGGTTT TTCTCTCGTT GGCTGTCCGC TAATGACTCT
GCCCTAACTT CAACGATTGG CACCAAGAAA CTGCTGAAAA TCCGAGTCAA ATGGTTCTAC
GCTACAGATG TACCACTTTC AAAGCCTGAG TGGTTCAACT ACCAGCAGGA GAAGGACGCT
GCCAATTTTA TACCTTTCTC AGACTACGAC TCTGGTCAAT TAGAGTCAAA ATACCAAGAA
TTGCACAGGC AAGTTCCGGC TTCCAGCGTA GACATATCAC CTACTGTGGA AGTCAATGAG
GACAAATTGT TCCAGGTAGA TTTGAAGAAG TTCGAGATAG AGCCGATTTA CTGGGAGGGA
CCCATTTACG AAGTTCGTAG GGGCACCTGG TTTGACTCTG GTGGTATACC TTTGCCCTAC
AAAGTTGCTA GGGCTATTGA AGATGGATAC CAACATTTGA AGCCATACCA ATTTGTTGAG
AGACCAGTGT TGGACGATAT GTTTTCAAAG GAAAACGTTG CTCGTTTCAG TAGCCAAAGA
GATCTTGTAG TTGAGTTCAA TAAGCTCAAG GATCTGGTCA AGGAAGTAGC CTCGTCTGTG
AAGCTAGATG AAGAACCAGA TCTCATAGAG CTTCTGAACG GGAACTATGT TCTCTTTGTA
GATAGCAAGG ATGCGTTCAT ATTTCCCAAA TCTTTCAACA CCCCTTTCCA ACTCAATGCC
ATTAGAACCC TTGCGCCCAC TAGTGCTGCC TACATGGTTG GAGTGCAAAA GATACAGCGA
GGTTACACGG ACGATTTGGG AGAGTCAATA TTGGACTCTA TTGCCAACAG CAACCCACTT
CCTAATTGGA CAGAGACAAT TGATTCGGAA TTAGGGTCGA TGTTTCGACA GAAGACTAAG
AAATCCGGAC AAGATAGCAG TACACAAGAG AATCAACATA TGAAGAAAGT CATGGAATCA
GACTATGATT TGGAAGTTTC TGCTGCTTCT TCCAATCGTG AAATTGACCA TTTGGTGCTC
TGTGTACATG GTATAGGGCA AGTATTGGGG GGTAAGTATG AATCGGTGAA CTTCACTCAT
AGTATTAACG TTCTTAGAAA AACGATGAGA ACAGTCTACA AAGAAGATAA GAGATACAAG
GCGTTGGCAT ACCCCAAGGA CGAGCTGGTA GAAACAACGA AGAACAATAG AATACAAGTC
CTACCTATAT CATGGAGACA TAAGGTGGAC TTCCATCCTT CCAAACCCAT AGAATCGTTT
GACAGCAAAG GGAAGCATCG TTTGCCTACT TTGTCACAGA TCAATGTCGA CGGTGTCAAG
GCTTTGCGAA GTCTTCTAGG TGACGTTGTA TTAGATATTC TTCTCTACTA TGAACCTAAG
TATGCCAATC AGATCTACTC AGTGGTGATT TCTGAGCTAA ACAGAGTATA TCAATTATAC
AAGGAAAGAA ATCCCCATTT CAATGGCAAG ATTCATATCA TGGGCCATTC GTTGGGATCC
GCTATTGTTT TTGACATAAT GTCGAACCAA CGCACAGTTC AAGGGCAAGG ACTTGATCTC
ATTAAGGAAT TAGACTTCGA AGTTGAGAAC TTGTTCTGTG TGGGCTCACC TGCTGGAATG
TTCAAGTTGT TGGAACAAAA GAACATTGCT TCACGTTCAT TGGTATCTGG TCCCATATCC
ACAGAGTATG ATTCTCCAAA ATGCAAAAGT TTGTTCAACA TTTTCCATCC ATGTGACCCA
GTAGGTTACA GAATGGAGCC ATTGGTTAAT CCAGAGTATG CTAGATTTAA GCCGGAACAA
ATTCCCTTTG CTGTGAGAGG CTTAAACACT CAGATCAAAG AATTGGCCAG CATGGGAGAT
GGACTCTCCG AGAAGATTCT AAAAGCCTCA AATTGGTTCA GCAAGGGCGG CGACGAAACA
AAGACAGACG GTAAGAGTGT AGAAGAAGTG GCAGCACAAG AGACTCCACT TGGAGACATT
ATTACATCCA TTGCCAAAGG AGGTAAGAAG TCTGACAGCA AGAGTGTGTC CAAAAAGGTT
GAACTTCAGG GTGATAAGTT GGAGCCGTTA CTAGCTTTAA ATCGAACAGG AAGAGTGGAT
TACTGTTTAC CTATGGGAGT GTTTGACCTT TCATTCATTT CTGCTGTAAG TGCACATGTC
TCATACTTTG AAGATGAGGA TACTGCTGGC TTTATAATGA AGGAAGTCCT CTCCTCCGGC
AAAGAAGCGG TAACATCCAA GACATTTACG ACCTATCAAT AA
|
|---|
| Protein sequence | MRTILKITSS VVGPTANHSF SYCVRHSVRF FSRWSSANDS ALTSTIGTKK SSKIRVKWFY
ATDVPLSKPE WFNYQQEKDA ANFIPFSDYD SGQLESKYQE LHRQVPASSV DISPTVEVNE
DKLFQVDLKK FEIEPIYWEG PIYEVRRGTW FDSGGIPLPY KVARAIEDGY QHLKPYQFVE
RPVLDDMFSK ENVARFSSQR DLVVEFNKLK DSVKEVASSV KLDEEPDLIE LSNGNYVLFV
DSKDAFIFPK SFNTPFQLNA IRTLAPTSAA YMVGVQKIQR GYTDDLGESI LDSIANSNPL
PNWTETIDSE LGSMFRQKTK KSGQDSSTQE NQHMKKVMES DYDLEVSAAS SNREIDHLVL
CVHGIGQVLG GKYESVNFTH SINVLRKTMR TVYKEDKRYK ALAYPKDESV ETTKNNRIQV
LPISWRHKVD FHPSKPIESF DSKGKHRLPT LSQINVDGVK ALRSLLGDVV LDILLYYEPK
YANQIYSVVI SELNRVYQLY KERNPHFNGK IHIMGHSLGS AIVFDIMSNQ RTVQGQGLDL
IKELDFEVEN LFCVGSPAGM FKLLEQKNIA SRSLVSGPIS TEYDSPKCKS LFNIFHPCDP
VGYRMEPLVN PEYARFKPEQ IPFAVRGLNT QIKELASMGD GLSEKILKAS NWFSKGGDET
KTDGKSVEEV AAQETPLGDI ITSIAKGGKK SDSKSVSKKV ELQGDKLEPL LALNRTGRVD
YCLPMGVFDL SFISAVSAHV SYFEDEDTAG FIMKEVLSSG KEAVTSKTFT TYQ
|
|---|
| |