| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_29522 |
|---|
| Symbol | |
|---|
| ID | 4837215 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009042 |
|---|
| Strand | + |
|---|
| Start bp | 478194 |
|---|
| End bp | 479615 |
|---|
| Gene Length | 1422 bp |
|---|
| Protein Length | 473 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640388530 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001382327 |
|---|
| Protein GI | 150863752 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.182383 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGGTA GAAGACGATA TAGTAACGAC AGAGATGGCA CCAAGAGGCA GAAACTAGAA
CTGAAAAATG CACGATTCCA TTCAAACAAC CAACCAAACA AACAAACAAA CGACAAATCA
GCAAGTTCAG TGCGACTCGG AGCAGTGAGT TCGTCTGAGG CAGGAGTTTC ATCTCAAGCA
TCTTCTGAAG GAAAAGGTGG ACTCAATGTA GAAATACATC CTCTTCTCAG AGCTACCGTT
CCTACTCCTG CCCTTCCTAA GAACCATAAT CCTCTTTCAC AGAATGTCCG GAAGTGGTTT
GATCCCTTTG CCATCAATCC ATACTTGAAA CAGACAGACT CGTCTGTTCC TCAGCATAAA
CCAAGACAGT TAGTTTTCAA CCCCAAGGGA AGGTATATAG CACAAGGAGA TGCCCTTCGT
GAAAAGATAG CTCTTGAACA ACAGCATAAA AAGGAACTTG AAGAAAAAAA GGCCCGAGGT
CTAGCTCCTG ATGAAAGTCT TGGGGAGCAA TTGTACAAAC CCGAACATCC TCCTCTGCTT
GAATGGTGGG ATAAGCCATT TGTATTGGAC AGAGACTATT CACAAATTGA AGATTCAACC
AGATTGAATT TGAATGATGA AGAACAGCCA GTTTCCATAT ATATCCAGCA TCCTGTTTTC
ATTCCACCAC CATGGGAAAA ACTCAATCCT GAAGCCAAAC CCATGTACTT GACCAAGAAA
GAGAGAAAGA GAATCAGAAA GAACGAAAGA CTGGAAAAGC ACAAAGACAA ACAAGATAGA
ATTAAGCTTG GTCTTGATGC ACCTCCCCCA CCAAAAGTCA AACTCTCTAA CTTAATGAAT
ATTCTCACCA ACGAAGCCAT CAAAGATCCT ACTGCTATAG AAATGCGTGT ACGACAAGAA
GTAGAAGAAA GACTCCAGAA TCATTTAGCA ACAAACGAAG CTAGGAAGCT TACTAAAGAA
CAGAGGCACG AAAAGATACA GGAACAAAGA GAAAAAGACC TCTCTAAGGG ATACTTTACT
TCTGTTTACA GAGTAGATAA TCTCAGCAAC CCCCAACACT TCTTCAAGGT GAACAAGAAT
GCCCAGCAGC TCGATTTGGT GGGTATCTGT TTGAGAAATC CCAAGTTCAA CTTGATAGTA
GTAGAAGGAG GACACAAAAG CATCAAATTC TTTAATAAGC TTCTTACTAA AAGAATCAAA
TGGACGGAGA ACGTTGTTCC TAAGCATAGT AATGAGTCTA CACAAGAACT CCAAGACTTG
TCTGCTAACA AATGCTATTT GGTGTGGGAG GGCCAGGTCA AAGAGCTTAG TTTCCAGAAA
TGGAGTGTGA TGTACTCACG TGATGAATAT GAAGCATTTG ACGTGCTCAA TAGATTTAGG
ATCGAGAATT ATTGGAGAGA AGCTTTAGTT GTAGAAAACT AA
|
|---|
| Protein sequence | MSGRRRYSND RDGTKRQKLE SKNARFHSNN QPNKQTNDKS ASSVRLGAVS SSEAGVSSQA
SSEGKGGLNV EIHPLLRATV PTPALPKNHN PLSQNVRKWF DPFAINPYLK QTDSSVPQHK
PRQLVFNPKG RYIAQGDALR EKIALEQQHK KELEEKKARG LAPDESLGEQ LYKPEHPPSL
EWWDKPFVLD RDYSQIEDST RLNLNDEEQP VSIYIQHPVF IPPPWEKLNP EAKPMYLTKK
ERKRIRKNER SEKHKDKQDR IKLGLDAPPP PKVKLSNLMN ILTNEAIKDP TAIEMRVRQE
VEERLQNHLA TNEARKLTKE QRHEKIQEQR EKDLSKGYFT SVYRVDNLSN PQHFFKVNKN
AQQLDLVGIC LRNPKFNLIV VEGGHKSIKF FNKLLTKRIK WTENVVPKHS NESTQELQDL
SANKCYLVWE GQVKELSFQK WSVMYSRDEY EAFDVLNRFR IENYWREALV VEN
|
|---|
| |