Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_29495 |
Symbol | |
ID | 4836850 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | - |
Start bp | 406979 |
End bp | 408199 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 12 |
GC content | 42% |
IMG OID | 640388165 |
Product | predicted protein |
Protein accession | XP_001382839 |
Protein GI | 126132628 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGCCGA GACTCTGTCG CTTTTCTATA GGGCTCACGG GACGCTCTAT CGTATTAAAT AGATCTACGT CTGTTTTTCC CAAACACTTT CATTCCAATC CGGTGGTTTT ATCGTTTACC TCCAGTTCTG GCTTTGAATA TGTGGAAAGC TACAAGAGCT TGAACGATAA GATCGAAGCT GTTTTTGGGC AGAAGGACGT TTCTGACGAC GACATAATAG CAGCTCTTGT TGCCTGTCGT AATCTAGAGC GAAACTATCC AGTCAATCAA CAGTTGCACA CCAATTCCAG ACTCATCCAA GAAGCTTCCC ATTCTATAGA GCTAATCTTC AAGAACGACA CCAAGTTCTC AGCTGAATTG TTGAAGAAGA TCTTTCTCTT GAAGTTGGCT ACTCCGTTGA ACTTGAAGAT TATCAACACT TTCTACGAAA AGAATCCAGG AGCCAATACC ATTATCGATA AGAGTACTGC ACTTGTAGCT TTGAGAAATG CCTTGGCCAA TGCTGACTTC CTCAATGCCA TCAAGTTGAC CGATGTGACT GTAGGCCATC CCAATTATAT CGAGCACAAC AATAGGATCC TCAGGAAGGG TTTTTCACAG TTGGTGGGTA CATCTTTGGT AATAACGTTC TTGACCAAGT ATGGAGTTAA TGAAATCATC GATATGGGGG CTTTGAACGA AGGCTGGAAA CATTTGGGAG CCATTAACTC GTTGATTTTA ACCTATTTGT TCAACTCCAG TTTCTTCTTG ACAATTGTCA GAGTCGGGCG ACAGTTAATC AGCTCCGGTG GTGACTATTT GACCTGGCAA AAAGGAACAT TCTATACCCA TTGGTTCAAA CATGCTGATG AGATGTTATT TTCAGCCAAA ATTGTAGAAG CTGATCGTCA GTTGAATGGT GGAGAGTCAA ACCCTGAGAT CATCAACGAG TTATGTAGAA CCAGTGACGA TATGTTCAAT ACCCAACGTA CATTACAGCC CGGATATAAT CGTGAAGGTG AAAAGATCAG ATTGTTGGAA GCCAAAGACA ATATGGAAGA CCTCAAAATG CAAGCATATT GGATGAGTGG AGGTGATGGC TTCGAATGGG TTGAACCAGA TCAGGATCCT GCCGATTTGA TCTGGAAACA ACATCTCGAT AGTTTTAATA AACCTACTCT AGACAATAAT AGCAAGGCTA AGAACTTGAA ATGGGCTGAA GAGTTGATTG GGGACAAGTA G
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Protein sequence | MLPRLCRFSI GLTGRSIVLN RSTSVFPKHF HSNPVVLSFT SSSGFEYVES YKSLNDKIEA VFGQKDVSDD DIIAALVACR NLERNYPVNQ QLHTNSRLIQ EASHSIELIF KNDTKFSAEL LKKIFLLKLA TPLNLKIINT FYEKNPGANT IIDKSTALVA LRNALANADF LNAIKLTDVT VGHPNYIEHN NRILRKGFSQ LVGTSLVITF LTKYGVNEII DMGALNEGWK HLGAINSLIL TYLFNSSFFL TIVRVGRQLI SSGGDYLTWQ KGTFYTHWFK HADEMLFSAK IVEADRQLNG GESNPEIINE LCRTSDDMFN TQRTLQPGYN REGEKIRLLE AKDNMEDLKM QAYWMSGGDG FEWVEPDQDP ADLIWKQHLD SFNKPTLDNN SKAKNLKWAE ELIGDK
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