Gene PICST_29400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_29400 
SymbolAQR3 
ID4837332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp169767 
End bp171416 
Gene Length1650 bp 
Protein Length549 aa 
Translation table12 
GC content42% 
IMG OID640388647 
ProductA(acid, azole) Q(quinidine) Resistance 
Protein accessionXP_001382795 
Protein GI150864097 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTCAG ATCAACGAGA TTCTGCGAAG CTAGAAAATA TGAAGCTGCA ATCGACAGAA 
GATAACACCC ACAATCTAGC CAGAACAGAG TCGCTAGACT CTGACAATGA TCTAGAGAAC
TTGCCCAACT TTGCCCACTA TAATGAAGCT GTTCCCATAG AACTTTCAGG AGTCAATGAA
GACGCGGTCT CCCGTCTGTT GTCGAGGATC CAGTCGCAGC GCTCAAGCTT ATCGCGCCCC
GCGGCTGCGA ATATTTTGCA CCCAGACCTT GAAGCCAATA GTGAACTAAC AAAAGAAGAT
GAAGGAAACA CATTTTCCAA AAGAACAAAA AACATCTGTG TTGTAATTGC TTCACTTTCT
GGTTTCTTAT CGCCTATGTC GTCACTAGCT TTTTTGCCTG CTGTCCCAGA AATTGCAGAC
AGATTCAACA CTACTGGAGA AGTCATCAAC ATCTCCAGCG CAGTGTATTG TATTTTCATG
TCCATTTCAC CGTGTATTTT CTCTCCTTGC TCAGACATTT ATGGAAGAAG GATTACTTTC
TTAGTTTGTG CTCTCTTGTT CAGCATATGT ACCGTGCTTG TGGCAGTATC TCCAGATCTT
CCGACATTCT TTATCTTCAG AGCGCTTACT GCCCTATTTG GTACTTCCTT TTTTAGTATA
GCTGCCCACA TCATTGGTGA TCTCTTTATT CCCGAAGAAA GAGGTACGAA TATGTCTTGG
GTTATTTCGG GAGCCCAGAT CGGAACTGCC TTTGGTTCCG TGCTAGGCGG TATCATTGTC
AATTACACAA GTTGGAGGGT TATATTCTGG GTAATGGCAG GTCTAGGATT AGTAATGACT
GTGACAGCAT TTGTGTTTCT CCCAGAAACC AGCAGACAAA CAAAGCACTC AATTTTACTT
GCTGAAATCA GAAAAGATAG GCCGGATAAA AAGTTTGTTT TCATTCCATT CAATCCTCTT
CGAATCATAG TTGCATTGAA GTACCCTAAT CTATCTATAG ATGGTTTCAT CACTATCGCT
GTTGTTTACG CCATGTATGC TCTTCTAACT CCAATTAGAT ACGTTGTCGA TCCACGTTTC
AATCTTACTA CTCCAATCTA CAGTGGACTT TTTTATTTGG CACCAGGTAT GGGATACTTG
GTAGGAAGTT TCTTTGGTGG AAAATGGGCA GACCATGTCG TCAAAAAATA CATAAGAATC
AGAGGAAGAA GAGTACCCGA GGATAGATTA CGAACAGTTT TGATTCCCCT TGGGATAGTA
TATCCTTCAT GTATGCTTAT CTATGGATGG TCTATTGAAA AAGAGAAGGG AGGAATGCCC
GTGCCCATCA TATTTATGTT CATTTCAGGA ATTGCCCAAA CTTGTATATT CCCAGCATCC
AATGCTTATT GTGTTGACTG TTTGCCAGAA TTAGGAGGCG ATGCTATTGG AAGTAGTTAT
TTCTCAAGAT ACTTGGCTGC TGCTGTTGCA TCAGCTACAT GTTTGAGAAG TGTTGATCTG
ATAGGTGTTG GCTGGACCTC TACTATAAGC GCCTTTGTGT TGTGGATTGG ATTCGGATGT
GCTTTGGTTT TGATTTACTG GGGAGAGGCC ATGAGAGTGA AATCACTTGT TAAGTATGGG
TTGAGAAAAG AAGAGGAACT AGTCACTTAG
 
Protein sequence
MTSDQRDSAK LENMKSQSTE DNTHNLARTE SLDSDNDLEN LPNFAHYNEA VPIELSGVNE 
DAVSRSLSRI QSQRSSLSRP AAANILHPDL EANSELTKED EGNTFSKRTK NICVVIASLS
GFLSPMSSLA FLPAVPEIAD RFNTTGEVIN ISSAVYCIFM SISPCIFSPC SDIYGRRITF
LVCALLFSIC TVLVAVSPDL PTFFIFRALT ALFGTSFFSI AAHIIGDLFI PEERGTNMSW
VISGAQIGTA FGSVLGGIIV NYTSWRVIFW VMAGLGLVMT VTAFVFLPET SRQTKHSILL
AEIRKDRPDK KFVFIPFNPL RIIVALKYPN LSIDGFITIA VVYAMYALLT PIRYVVDPRF
NLTTPIYSGL FYLAPGMGYL VGSFFGGKWA DHVVKKYIRI RGRRVPEDRL RTVLIPLGIV
YPSCMLIYGW SIEKEKGGMP VPIIFMFISG IAQTCIFPAS NAYCVDCLPE LGGDAIGSSY
FSRYLAAAVA SATCLRSVDS IGVGWTSTIS AFVLWIGFGC ALVLIYWGEA MRVKSLVKYG
LRKEEELVT