| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_29392 |
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| Symbol | SWF3 |
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| ID | 4836766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | - |
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| Start bp | 158959 |
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| End bp | 159648 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640388081 |
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| Product | coiled-coil membrane protein |
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| Protein accession | XP_001382792 |
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| Protein GI | 150864095 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.130064 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGTATTC TCGCTGCTCT TGATCTTCAT CCATACACCC TTGTGGTGTC GCTGTTCACA
GTGCTTTTGA TCCAGCAGTT GGTCGGTTTC ATAGGCAAGT CAACCATCCA GGAGTTTGCC
TGGTTGTTCT ATCTTCGTGT TGGAGGGAAA TTGGGACTCC TGAATTCGTT TGTAGCCCAC
ACCAAGAAAC AGGAAGAGCT CCACAAGCTC AACAGAGAAA AGAGATCAAT TAGTGCACAG
GATGAATACG CCAAATGGAC CAAGTTGAAC CGTCAAGCCG AGAAACTAAC TGCCGAAGTC
AAGTCCTTGT CTGATGACAT TGCCAAAGAT AAAAGTAAGA TCAATTCTTT GGTAGGTGTA
GTTCTCTTAT TCCTAACTAC TCTACCATTG TGGGTATTCC GTCTTTGGTT TAGAAAATCG
GTATTATTCT ATCTCCCTAC TGGTGTATTC CCATACTACG TAGAAAGAGT TCTTGCCATA
CCCTTCTTTG CCTCGGGATC TGTTGGGTTG ACGGTGTGGA TGTTTGCTGT GAATAACGTC
ATTTCTTCAG TATTGTTCTT ACTTACTTTT CCTTTCAAAC CTAGTGTACC TATTCCAATC
AGGCAGACAA AGGTAGAAGA AGTGGTACCG GAATCCGCTG AAAGCAAGGA ATCCAGCCCT
GAAGTCATCG ATATCGCTGA TGCAAACTAG
|
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| Protein sequence | MGILAALDLH PYTLVVSSFT VLLIQQLVGF IGKSTIQEFA WLFYLRVGGK LGLSNSFVAH
TKKQEELHKL NREKRSISAQ DEYAKWTKLN RQAEKLTAEV KSLSDDIAKD KSKINSLVGV
VLLFLTTLPL WVFRLWFRKS VLFYLPTGVF PYYVERVLAI PFFASGSVGL TVWMFAVNNV
ISSVLFLLTF PFKPSVPIPI RQTKVEEVVP ESAESKESSP EVIDIADAN
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