Gene PICST_29369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_29369 
Symbol 
ID4836682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp96738 
End bp97232 
Gene Length495 bp 
Protein Length164 aa 
Translation table12 
GC content39% 
IMG OID640387997 
Productpredicted protein 
Protein accessionXP_001382250 
Protein GI150863692 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0183419 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00530546 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGACAAAG GTTACTATAT TCACTCATTG AGTTATATAA ATGCAAGCAT TTCTGATGAC 
AACGTAATCT ATGCTTCTGA CTACACCTTC ACTGTTGGTA CTGCCAATGA ACCAATTGCA
AATGTGCACT TGATAAACAA CAAGCATTTC ATTTCAGTTG ACGACTTCTC CGATACAGAT
CTCGCTAAGA GAACGGACGT AAGCGATCTG GATGCATTTG GTACCGAGAA AATGTCTCAA
GGAGCCATAA TTAGTCAGGG ATGTCATAAG TATGGATCCA ATGAAGAACT CAATACAAAG
AACGACTGGG CAACTATGAT GGATCTTATC TACGACTATT CTGACTTGTG GAAAAAAGAC
AATAAGCATC ATTTGCATTA CACAATTCAT GATCAAAACC ACAACCACGT TATATTCGCA
CAAGGAGAAT TAAAGTTAGG TAGCAAGCAA GACTACTCTG ACTGGGCCAA CTGGAACACC
ATTTGCGATG AATAA
 
Protein sequence
MDKGYYIHSL SYINASISDD NVIYASDYTF TVGTANEPIA NVHLINNKHF ISVDDFSDTD 
LAKRTDVSDS DAFGTEKMSQ GAIISQGCHK YGSNEELNTK NDWATMMDLI YDYSDLWKKD
NKHHLHYTIH DQNHNHVIFA QGELKLGSKQ DYSDWANWNT ICDE