| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_29359 |
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| Symbol | NPL6 |
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| ID | 4837671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | - |
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| Start bp | 73696 |
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| End bp | 75078 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640388986 |
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| Product | possible Polyadenylate-binding protein (RRM superfamily) |
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| Protein accession | XP_001382775 |
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| Protein GI | 126132500 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5271] AAA ATPase containing von Willebrand factor type A (vWA) domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.115134 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0214952 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCAGAT CATCGCGTAG CAGTGCTGGC AGTTCTCCTG AGGCCACGAG ATCGCCTCGA
GCCATCCGGG CCCACCGTTC TGATTTGTCT GGTTTGGATT TGAACGAAGA CGATGGAGAT
GAAGAATACA AAATAGATGA CAATGTAGAT GTTAAGGACG AATTGGCAGA AGAAGATGAC
GACGTTGAAG ATGAGGACAC GTCGATCGTT CGTCATAGAT CTCGTAAGAG AAAGGCTACT
ACGAACGATG AAGATGATGA TGACGAAGAA GATGATGACG AAGAAGCAGA AGAGGAAGAG
GAAGACGCAG ACGAAGATGC AGAGGATGAA CCTAATGAAA ATGCAGAAGA AGAAGATGGA
GAAGACATGA AGGTGAAGCA AGAAGTTAAA CGCCAGCCAT TGAAGGAAGA ACCTAGAAAG
CCTAAGAAAA GAGGAAGAAA GAAGCTCAAC ATTACCATCT TGGAAGATGG AGTCTACGAT
GAAGATGGAA ACCCGCTCAA CGTCAAGAAC GATGAGGTTG TTATTGACCA CGAGGATCCA
AAGGGACACA CCAAGATAGA CGAGAACGGG GTATTGCAGG GAGGAAGGCA GTTCAGAATG
AAGACATTTA AGTTGTTAGG TCACGGTGAC CAATTATTCA TGGTTTCGAC AGAACCAGCT
AGACTTGTAG GATTCAGAGA TTCATACTTG TTGTTCAAGA CTCATAGATC GTTGTTCAAG
AAAGTCTGTA CCAATGAAGA AAAGATGGAC TTAATCGATC GTGCCATTAT CCCTAATTCG
TATAAGGGTA GATCTGTCAA CTTGGTAGCA GCTCGTTCGA TTTTTAGAGA ATTTGGTGCC
AAAATGATTA TCGATGGTAA GAAGGTCATC GACGATTTCT GGGAGCAAAG GGCAATCGAA
CGTGGAGATA TTGCAGGAGA ATATGCTGAC CCCTTACAAT ATTTCGGACC AGTTGGAAAG
GTAGGTAGTG TGTTAGGCGA TTCCAATACC AACGGAGGTT CTACACCAAT CACATCCACG
CCATTAGTGA ATTACCAAAC AGATCCAACC TGGATGTATC AAATAGCCGT TAAAACTAGA
GAACATAACA ACAAGTTGCA AGAGCAAAGG AATCAGTCTT TCAACCGCGG GGCCAAAGAT
ATTTTCACCA ATTCTACATT CTATCCTGAG TCAACACAGC CAACGTCGGT AAAATATGGT
GTCTATAAGG AAGAAAAGAA GCCTTCAAGT CTCACGTACG ATATCAAGTT TGTGAATCCG
AACATAAAGA AAAGAGCTAC CGGCTTGAAG AACGTTCCTA AGGATATCTT CAATGATATC
GACGATGAGG AAATTAAGCG AGCCATCATT GCCCAACAAG AATATGAGAA AAGTATTGTG
TAG
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| Protein sequence | MPRSSRSSAG SSPEATRSPR AIRAHRSDLS GLDLNEDDGD EEYKIDDNVD VKDELAEEDD
DVEDEDTSIV RHRSRKRKAT TNDEDDDDEE DDDEEAEEEE EDADEDAEDE PNENAEEEDG
EDMKVKQEVK RQPLKEEPRK PKKRGRKKLN ITILEDGVYD EDGNPLNVKN DEVVIDHEDP
KGHTKIDENG VLQGGRQFRM KTFKLLGHGD QLFMVSTEPA RLVGFRDSYL LFKTHRSLFK
KVCTNEEKMD LIDRAIIPNS YKGRSVNLVA ARSIFREFGA KMIIDGKKVI DDFWEQRAIE
RGDIAGEYAD PLQYFGPVGK VGSVLGDSNT NGGSTPITST PLVNYQTDPT WMYQIAVKTR
EHNNKLQEQR NQSFNRGAKD IFTNSTFYPE STQPTSVKYG VYKEEKKPSS LTYDIKFVNP
NIKKRATGLK NVPKDIFNDI DDEEIKRAII AQQEYEKSIV
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