| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_29351 |
|---|
| Symbol | VCC3.2 |
|---|
| ID | 4837127 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009042 |
|---|
| Strand | + |
|---|
| Start bp | 54820 |
|---|
| End bp | 55865 |
|---|
| Gene Length | 1046 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640388442 |
|---|
| Product | Vesicle coat complex AP-3 |
|---|
| Protein accession | XP_001382240 |
|---|
| Protein GI | 150863685 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.637046 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGAGCG GGAAGTTGCA ATATTTTGCA AGTACCTACT TTCCACAGAC AGACAATTAT
CGCTCATATC AGATGCTATT CATATATTGG CTTATTCTAG CTAATCAATT GGTAGCACAA
GCGCTTCTTG TGCCAGGACA CAAAGTCCCA TTTCCTCGTG TTAGAGCTTT GGCTTCAAAC
AGAAGCACGC TTAGACCACT ATCAAATTTG GCGGATGATA GTCAGATTGT TGGTCAGTTT
TCATTCCGAA GTATCTTGAA ATACTTCCGA GGAGAAGACA ATGACGATGA CTGTGAAGAC
GACAGTGAAG AAGAAGAGCT TGGTACTTAT GAACTTGAAA ATAGCGAATC AGATGTAGAA
AGTGAATCTG ATAATGAACC AGAGACAGTT GAAGAATGGT ACTACAGCGA TTCAGAAGAG
GAAACTGACG ATGATTCCGC AGATGGATTT ATCAGATTCA AATATTATTC CATACCAAAC
GGAACCACAC ACAATAGTAC TGAAAAGGTA GTTCCCATTT CTTCTGTCAA CAATACCCCA
GAGAAGAAAA TGCCTTCAAT AAAGAAAGAT AAGTTTCCTT ACAAGGATCG AAACAATATC
TACAATTTCC TTAACAGGAC ATCTGATGAC GAGATCATAA GCGCGGCAAA GAATTTCACA
GGAAATCTTC TCGGTACGAA GATGTTTAGA AAAGTAGTTT CTGGGTTGAA TACACTAGTA
TCGAAAGGTC TCAATCGTGC CACAAAGAAA ATGAATGACA CCGAAATCGA AGACTGGGTT
GCGTTGTATA ATATTGTCTT GAATTCTGAG CCCACGAAGG CGATTTCACA TCTTGTTCTG
GATGAGAAGT CGAAGCTGTT AATTAAGAAT GCTGTATACG ACTCTCTCTC CTACGCACAC
AAGAAGGCTC AGAGCATGAA CATGACTCAG ATTAAGCTTG GGTATAAGAC TATCGTTGAT
GGTGTAAATC TTGTTACAAC ACTGAGTGTC TCAAGTAAGG CTCCATTGGA AATGAGCAAT
GGCCAAGAGG AATCGAATAT GAATGA
|
|---|
| Protein sequence | MTDNYRSYQM LFIYWLILAN QLVAQALLVP GHKVPFPRVR ALASNRSTLR PLSNLADDSQ
IVGQFSFRSI LKYFRGEDND DDCEDDSEEE ELGTYELENS ESDVESESDN EPETVEEWYY
SDSEEETDDD SADGFIRFKY YSIPNGTTHN STEKVVPISS VNNTPEKKMP SIKKDKFPYK
DRNNIYNFLN RTSDDEIISA AKNFTGNLLG TKMFRKVVSG LNTLVSKGLN RATKKMNDTE
IEDWVALYNI VLNSEPTKAI SHLVSDEKSK SLIKNAVYDS LSYAHKKAQS MNMTQIKLGY
KTIVDGSIGN EQWPRGIEYE
|
|---|
| |