Gene PICST_27939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_27939 
Symbol 
ID4836993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp585391 
End bp585570 
Gene Length180 bp 
Protein Length60 aa 
Translation table12 
GC content47% 
IMG OID640388308 
Productpredicted protein 
Protein accessionXP_001382350 
Protein GI126131650 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.4979 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCCTC GTATACGGCA GTTGTACCGG CAATTGCTCT TCATGGGTCG AGACTATCCC 
GTCCAGTCTG GAGGATATGG CAAGTTTCGA ACTCAATTGA AGAGATCATT TGAGAAGACT
GAAGTGGTAA GTGAAGAGCA ACTACAGAAA GCTCTAGCAA AGGGTGACTA TGTGGTCAAG
 
Protein sequence
MDPRIRQLYR QLLFMGRDYP VQSGGYGKFR TQLKRSFEKT EVVSEEQLQK ALAKGDYVVK