| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_24789 |
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| Symbol | |
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| ID | 4836970 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | - |
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| Start bp | 1344233 |
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| End bp | 1345738 |
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| Gene Length | 1506 bp |
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| Protein Length | 468 aa |
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| Translation table | 12 |
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| GC content | 45% |
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| IMG OID | 640388285 |
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| Product | Predicted E3 ubiquitin ligase |
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| Protein accession | XP_001383023 |
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| Protein GI | 150864272 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5540] RING-finger-containing ubiquitin ligase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ACAAGATCGG TTTTCCAGCC ACAGTTGTTC TTGATGTTCG CAGCCGTACT TGTGATGTTC
TACTGTGTGG ATCATTTCAC GAAGGGCCAG CTTGACTTCG ATGATGCGCT TTTTTTGACC
CGAAACTCGT TCAAAGAGCT CAAGGACACG TATATGCCAC GGGGAATACA CGTACGTCAC
GACGGTTTGG CCAATCAGAC GTCGTCTACG ATATTCAACG TCGATCTAGA CTATCCGTTG
AATAGTGTGG TGAATTCTTT CTTCCCTATC GATGCTCTCA TAGCTTTCAA CACAACCAAC
ACTACACACA GTGTAGACAC TATGGGTGAC GAGTCCCTCT TAAGTGCGCA AGCATATCCA
GAAAGTGAAG ATGACAACAA TAACAAAAAT GATACTGGTA TCAGCCGGCA CGAGATCACC
GCCCGGTACG CTTCGTTTCT GCCAATTCTC AACTACCACA TGAGAAGACA GTACAAAATT
CTTCCTACAA ATGGCTGTAA CAAGCTGGAT CTAAACCTCA GCCACAAACA GTACAAGAAT
AAAGTACTAA TCGTTTTGCG CGGCGATTGC ACGTTTGTAG ATAAGGTCTC CAACATCTTG
AACCTGGGCC TAGACCCGGC TGCCGTCATC GTAGCCAACG ACGAACCATA CAGGGGTTTG
GTGACGATGT TTCTGGCCAA CTTCAATCAG GATGGTCTGC TTAGAATTCC GATCATGTTC
ATTACTAATG AAGATTATCA TGTGTTGAAG AAGTTGTCTG TAAAGGATGT GCCTGATATT
ACTTTGGATC TCAGCACAGC CTCGATAGGC AGCTGGTTCA GCATAATTGC CTCTATGGTG
TTATCACCCC CTCTCCTAAT CATCATCTTC TACTCCATCA TCATCTGTGG CCAGAAGTTG
AAGCGTAGAC AAGCCAACAT CCGTAATGCT AAGCTTGTGA GAGAACTCCC TGTCTACATA
TACAATGGTA GCCATCTTAT CCATGCTAAG TATTTAAGCA CATATTTGAA GGTAACTGGC
CAGAGCCAAA GTCAGGGAAA GAGTCAAGAT CAGAATCAGA ATCAGAATCA GAATAATACC
CAGAACATTA GTCTGACAAT CTCTGTCAAA GATGTTCCAG TTAACTTTTC TGATTCGCCG
AAACAATCAC CATCGTCTTC ATTTGCCTCG CTCGATCGCA TTCTCGTGAA CGGCATAGAT
ATTCGCGCCT CTGCCAACTC CCTCCATATT TTGACAGCTC CTGAAAACTT CTATCCAGCC
TACAAATGCT CTATATGTCT TGAGAAGTAT TCTCCGCTCA AATCACGGGT GCTTGTATTA
GATTGCAAGC ATATCTACCA CGAGCGGTGT TTGTCCAACT GGTTGATCAA CTTCAGAAGA
AGTTGTCCCT TGTGCAATGT CATGATAAAT CCGTCTACGG AGCCGTATCT TCTTGCTGGA
CAAGACAGTT CATCTTCCGA CTACGGCAGC ATGGATGAAA CCGACTTGGA GGCACAATCC
AATCCT
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| Protein sequence | TRSVFQPQLF LMFAAVLVMF YCVDHFTKGQ LDFDDALFLT RNSFKELKDT YMPRGIHVRH
DGLANQTSST IFNVDLDYPL NSVVNSFFPI DALIAFNTTN TTHSVDTMGD DRHEITARYA
SFSPILNYHM RRQYKILPTN GCNKSDLNLS HKQYKNKVLI VLRGDCTFVD KVSNILNSGL
DPAAVIVAND EPYRGLVTMF SANFNQDGSL RIPIMFITNE DYHVLKKLSV KDVPDITLDL
STASIGSWFS IIASMVLSPP LLIIIFYSII ICGQKLKRRQ ANIRNAKLVR ELPVYIYNGS
HLIHAKYLST YLKVTGQSQS QGKSQDQNQN QNQNNTQNII NFSDSPKQSP SSSFASLDRI
LVNGIDIRAS ANSLHILTAP ENFYPAYKCS ICLEKYSPLK SRVLVLDCKH IYHERCLSNW
LINFRRSCPL CNVMINPSTE PYLLAGQDSS SSDYGSMDET DLEAQSNP
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