Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_21982 |
Symbol | |
ID | 4837593 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | + |
Start bp | 574445 |
End bp | 575029 |
Gene Length | 585 bp |
Protein Length | 183 aa |
Translation table | 12 |
GC content | 42% |
IMG OID | 640388908 |
Product | predicted protein |
Protein accession | XP_001382349 |
Protein GI | 150863765 |
COG category | [S] Function unknown |
COG ID | [COG5134] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGAAA GGAAGGCTAT CAACAAGTAC TATCCTCCCG ACTGGGATCC ACTGAAAGTG GTTAAACGAA AACGTGACCC AAATCAGACG ATCAAAATCA GGATGATGGC TCCGTACCTG ATGCGATGCA CCAAGTGCAA TGAATATATA GCAGAGAGAA GATCGTTCAA CGCGAGAAAA GAGACGACAA ACGAGACGTA TTTGAAAACA AAGATCATTA GATTTCACAT CACATGTCCC CGGTGCAACA ACCATATTTC ATTCAAGACA AATCCCCAGA CAGCAGGGTA CACACCTGAA GAGGGAGCAG TACGAAACTA TGAGCCTACC AGAAAGGTGA CTTCTACCAA CGTGCCGAAA GATAGGCAAG AGACTGAAGA TGAGTTGCTC CAGCGATTAG AGAAGGAAGA ACAAGAGAAT CTCAAATTTC AGACTTTGAA AGAAAGGAGA AAGAGAAATC CGTTTTGGAA CAAACAGGAA TCGCTTCAAG CGGGAGGAGA TGTATATGAG AATTTGGAGA AAAGATTACT GGAACAGCAG CGAGAACAAC AGCTAAATGA ACATTTGGAA GAATTACAAA TGAAA
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Protein sequence | MSERKAINKY YPPDWDPSKV VKRKRDPNQT IKIRMMAPYS MRCTKCNEYI AERRSFNARK ETTNETYLKT KIIRFHITCP RCNNHISFKT NPQTAGYTPE EGAVRNYEPT RKTEDELLQR LEKEEQENLK FQTLKERRKR NPFWNKQESL QAGGDVYENL EKRLSEQQRE QQLNEHLEEL QMK
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