Gene PICST_21982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_21982 
Symbol 
ID4837593 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp574445 
End bp575029 
Gene Length585 bp 
Protein Length183 aa 
Translation table12 
GC content42% 
IMG OID640388908 
Productpredicted protein 
Protein accessionXP_001382349 
Protein GI150863765 
COG category[S] Function unknown 
COG ID[COG5134] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGAAA GGAAGGCTAT CAACAAGTAC TATCCTCCCG ACTGGGATCC ACTGAAAGTG 
GTTAAACGAA AACGTGACCC AAATCAGACG ATCAAAATCA GGATGATGGC TCCGTACCTG
ATGCGATGCA CCAAGTGCAA TGAATATATA GCAGAGAGAA GATCGTTCAA CGCGAGAAAA
GAGACGACAA ACGAGACGTA TTTGAAAACA AAGATCATTA GATTTCACAT CACATGTCCC
CGGTGCAACA ACCATATTTC ATTCAAGACA AATCCCCAGA CAGCAGGGTA CACACCTGAA
GAGGGAGCAG TACGAAACTA TGAGCCTACC AGAAAGGTGA CTTCTACCAA CGTGCCGAAA
GATAGGCAAG AGACTGAAGA TGAGTTGCTC CAGCGATTAG AGAAGGAAGA ACAAGAGAAT
CTCAAATTTC AGACTTTGAA AGAAAGGAGA AAGAGAAATC CGTTTTGGAA CAAACAGGAA
TCGCTTCAAG CGGGAGGAGA TGTATATGAG AATTTGGAGA AAAGATTACT GGAACAGCAG
CGAGAACAAC AGCTAAATGA ACATTTGGAA GAATTACAAA TGAAA
 
Protein sequence
MSERKAINKY YPPDWDPSKV VKRKRDPNQT IKIRMMAPYS MRCTKCNEYI AERRSFNARK 
ETTNETYLKT KIIRFHITCP RCNNHISFKT NPQTAGYTPE EGAVRNYEPT RKTEDELLQR
LEKEEQENLK FQTLKERRKR NPFWNKQESL QAGGDVYENL EKRLSEQQRE QQLNEHLEEL
QMK