Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_13387 |
Symbol | |
ID | 4837098 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | - |
Start bp | 2057570 |
End bp | 2058076 |
Gene Length | 507 bp |
Protein Length | 169 aa |
Translation table | 12 |
GC content | 46% |
IMG OID | 640388413 |
Product | predicted protein |
Protein accession | XP_001383160 |
Protein GI | 126133270 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.618265 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | CCTCCCATCA CTAACAAGGT TTACTTTGAC ATCACTGAAG ATGGAAAACC CTTAGGCAGA ATTACCATTG GCCTTTTTGG AACTGTGGTG CCCAAGACGG TAGAAAACTT CCGTCAATTG GCAATTTCCA AAGATCCTAA ATTTGGCTAC ACTGGCTCCA TTTTTCACAG GGTGATCAAC AAATTCATGC TTCAAGGAGG AGACTATGAA ACCGGCCAGG GTTACGGTGG AAAGTCGATC TACGGGGGCA AGTTTAACGA CGAGAACTTC GAATTAAAGC ACGACCGCAA GTATCGCTTG TCGATGGCCA ATTCTGGCAG GAACACCAAT GGTTCGCAGT TCTTCATCAC CACTGTTCTC ACCAGCTGGC TTGATGGAAA ACACGTCGTT TTCGGTGAAG TTGTCGACGG TTTTGATGTT GTTGACTATA TCGAAAACGT TAAGACCAGT CACGGAGACC GTCCCGTTAA GGAAATCAAG ATCGCTGAAT CGGGTGAGAT CGAAGTT
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Protein sequence | PPITNKVYFD ITEDGKPLGR ITIGLFGTVV PKTVENFRQL AISKDPKFGY TGSIFHRVIN KFMLQGGDYE TGQGYGGKSI YGGKFNDENF ELKHDRKYRL SMANSGRNTN GSQFFITTVL TSWLDGKHVV FGEVVDGFDV VDYIENVKTS HGDRPVKEIK IAESGEIEV
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