Gene PICST_13387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_13387 
Symbol 
ID4837098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp2057570 
End bp2058076 
Gene Length507 bp 
Protein Length169 aa 
Translation table12 
GC content46% 
IMG OID640388413 
Productpredicted protein 
Protein accessionXP_001383160 
Protein GI126133270 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.618265 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CCTCCCATCA CTAACAAGGT TTACTTTGAC ATCACTGAAG ATGGAAAACC CTTAGGCAGA 
ATTACCATTG GCCTTTTTGG AACTGTGGTG CCCAAGACGG TAGAAAACTT CCGTCAATTG
GCAATTTCCA AAGATCCTAA ATTTGGCTAC ACTGGCTCCA TTTTTCACAG GGTGATCAAC
AAATTCATGC TTCAAGGAGG AGACTATGAA ACCGGCCAGG GTTACGGTGG AAAGTCGATC
TACGGGGGCA AGTTTAACGA CGAGAACTTC GAATTAAAGC ACGACCGCAA GTATCGCTTG
TCGATGGCCA ATTCTGGCAG GAACACCAAT GGTTCGCAGT TCTTCATCAC CACTGTTCTC
ACCAGCTGGC TTGATGGAAA ACACGTCGTT TTCGGTGAAG TTGTCGACGG TTTTGATGTT
GTTGACTATA TCGAAAACGT TAAGACCAGT CACGGAGACC GTCCCGTTAA GGAAATCAAG
ATCGCTGAAT CGGGTGAGAT CGAAGTT
 
Protein sequence
PPITNKVYFD ITEDGKPLGR ITIGLFGTVV PKTVENFRQL AISKDPKFGY TGSIFHRVIN 
KFMLQGGDYE TGQGYGGKSI YGGKFNDENF ELKHDRKYRL SMANSGRNTN GSQFFITTVL
TSWLDGKHVV FGEVVDGFDV VDYIENVKTS HGDRPVKEIK IAESGEIEV