| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_10913 |
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| Symbol | PPR1 |
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| ID | 4837524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | - |
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| Start bp | 801233 |
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| End bp | 803161 |
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| Gene Length | 1929 bp |
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| Protein Length | 643 aa |
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| Translation table | 12 |
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| GC content | 41% |
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| IMG OID | 640388839 |
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| Product | Fungal specific transcription factor |
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| Protein accession | XP_001382926 |
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| Protein GI | 150864199 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0760081 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.897103 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TCAGGAATCT CAAGGTCTAT ATCGGCCTGT CAGCGGTGTA GAAAGAAGAA AGTGAAATGT
GATCAGCGAC TTCCAAAGTG TTCCAAGTGT GAAAAGGCTG GCTCAGAGTG TATTGGCCTT
GATCCCATAA CAGGCCGTGA GGTTCCTAGA TCTTACGTGA TGTATTTGGA AGATAGAGTG
AACATGCTCG AGCAGAGACT TCGTGACAAG GGGATCACAC TTGACGATCA GGAAACAACC
GAAATTCGCA ACAGCAAGGT TAAAGTAGAA GATAGAGTCC TTTCAAAGGG CAGTATTCCT
TGTGAGTCTT CTCTGGTGAT AGTGAAAAGC ATTCTGATAA GCTCAGAGAA GACTGATATA
CACACATTAG ACGAAAGTCA ACACGCACCA AGTATCGCCT TTTCACGTTT GATGTCAACA
GCTGTGAAAA TACAGAAAAG GTCACTTTCT AACCTCCAGC ATCCTCTAGC TTCAAAGAGA
TTTGCCAATA ACTCAGGTGC AACTACGGAT CCGAGCAACG GTATTTTACC AGCGATATTG
CCTCCTAAAT CAACGGCATT ACAGTTCATT CTGATCTTTT TCACCCAGGC GAATCCTCAG
TTGCCAATTT TCCATCGTGA AGAGTTCATC TCCAAATACT TCATACCTAT CTACGGCTAC
TTCAACTATG AAGAAGTGTC TATTGCGTCA GATTATACAT CTATAAATGC GGCTTTCTTC
GAGAACGAAA ATATGAAAGT ACCGTGGACA CCGTGGTTTG AGCAGTATAA GGACAATTTC
CAGTCAATCT TGGGCACAAA TGCTAGCAAA GCTTCCAATG ACGAAATCAA AAAGATTTCC
AACTCTATTA TTCCACCAAA ACAATATAGA AAGGGACTCT TCTTCCTAAA CATAATTTTC
GCAATAGCGT CTTCTGTGAA TCATCTACAA TACCCGATTT CCATCTCGGA GTCGTTTCGC
CTTGCAGCCA ACAAGTACTT CGAAGAAGTG AATAGCTCTA CAGATCAACT TGAATCCTTG
CTGGCTATAT TAACATATTC ATTATATTCT ACCATGAGAC CTTCAAATCC TGGTGTCTGG
TACACGATGG GATCGGCATT GAGAACTTGT GTAGATTTGG ACTTGCACAA CGAAAGCAAC
TCATCAAGTG CCCATAATAT CGATTCCTTC ACTAAGGAAA AAAGAAGAAG GCTCTTTTGG
TGTACTTATT GCATAGATAG ACAAATCTGT TTCTATCTAG ATCGTCCCGT GGGAATTCCT
GACGAGAGCA TCAATACGCC TTTCCCAACA GTATTGGACG ATTCTCTAGT TTATCCCAAT
GAAACGATCA AGGATTTCTC ACTTCTTGCT AACTCTACGC CCTCATACAA GACAGTCTTT
TTGTCCATGC TTCAGATGAG AAAGATTCAG TCAGAAGTGC AAAAGGTTTT GTATACTAGT
TTCGAATTGC CTCGTCGTTA CGATGGGTTG GATAGCTGGA AGAAATCGAT CTTGAACAGG
CTCGGTCTTT GGAAGCAGAA TATCCCTAAA TCTCGTAAAG AAATGAACTG TGACTTCAAT
CTAAACTTCT TCCATTTGAA TTACTATCAT GTCAAGCTCA TGATCCACGG CTTGTCCCCC
AAAAATTACA AGCTTTCATC TAACGATTAC ACACAAGTCA AGTATGCTGC CAAGCAGATG
ATCAATTGTT ATGCGCAATT GTTCTCAACA AAGAGTATCA ATTATACGTG GGCAGCAGTC
CACAATATTT TCATGGCAGG AACATCCTAT CTACACACGA TATACAACAG TGAAGATGCC
AGAGTCGATG AGCCATTGCA TGAAGTGAAA CGAGTATCGT CTGATTGTTT GAATGTGCTC
AATTCCTTAA TCGACAGCTG CGAGGCTGCT TCTCACTGTG TAGAAGTATT TCAAAGTTTG
ACAATGGTT
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| Protein sequence | SGISRSISAC QRCRKKKVKC DQRLPKCSKC EKAGSECIGL DPITGREVPR SYVMYLEDRV
NMLEQRLRDK GITLDDQETT EIRNSKVKVE DRVLSKGSIP CESSSVIVKS ISISSEKTDI
HTLDESQHAP SIAFSRLMST AVKIQKRSLS NLQHPLASKR FANNSGATTD PSNGILPAIL
PPKSTALQFI SIFFTQANPQ LPIFHREEFI SKYFIPIYGY FNYEEVSIAS DYTSINAAFF
ENENMKVPWT PWFEQYKDNF QSILGTNASK ASNDEIKKIS NSIIPPKQYR KGLFFLNIIF
AIASSVNHLQ YPISISESFR LAANKYFEEV NSSTDQLESL SAILTYSLYS TMRPSNPGVW
YTMGSALRTC VDLDLHNESN SSSAHNIDSF TKEKRRRLFW CTYCIDRQIC FYLDRPVGIP
DESINTPFPT VLDDSLVYPN ETIKDFSLLA NSTPSYKTVF LSMLQMRKIQ SEVQKVLYTS
FELPRRYDGL DSWKKSILNR LGLWKQNIPK SRKEMNCDFN LNFFHLNYYH VKLMIHGLSP
KNYKLSSNDY TQVKYAAKQM INCYAQLFST KSINYTWAAV HNIFMAGTSY LHTIYNSEDA
RVDEPLHEVK RVSSDCLNVL NSLIDSCEAA SHCVEVFQSL TMV
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