| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_4185 |
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| Symbol | |
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| ID | 4894964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009040 |
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| Strand | + |
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| Start bp | 119508 |
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| End bp | 122597 |
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| Gene Length | 3090 bp |
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| Protein Length | 1029 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640110576 |
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| Product | Na-Ca exchanger/integrin-beta4 |
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| Protein accession | YP_001041888 |
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| Protein GI | 126464912 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2931] RTX toxins and related Ca2+-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 53 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 87 |
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| Fosmid unclonability p-value | 0.610735 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATTC TTCCGACCTT CAGCGTCACC AGCACCCCCG TCGTCGAGGG CAATTACCTC
ACCTACACCA TCCGCCTCTC CGAGCCCGCC CCCGATGCGG TGAGCGTGGA TTACCTGTTC
CGCTCCGGCA CCGCGCTGCT CGACGAGGAT TTCTATTCCA CCGCCCCCTC GGGCACGCTC
GTCTTCGCCC CCGGCGAGAC GGTGCTGACG CTCCAGATCC GGTCCTACAA CGACAGGCTC
GACGAGACCG ACGAGAGCTT CTTTCTCGAA CTGAGCGATC CGCAGGGCGC GCAGTTCGGC
GCCAACATCT CGACCCTCGT CACCGCGGGC TGGGTGATCG ACGACGATGG CGTGGGGGTG
AACCGGGCGC TGGCCGTCTC GAACCCCGTG GTGACCGAGG CCGCGGGCGG GCAGGCGCTC
TTCACCCTCA CGCTGTCGGA GGCCTTCACC ACCGACCGCA GCTTCACCTA CACGACCCAT
GACGGCTCGG CCCGGGCGGG CGCGGATTAT GTCGCCCGCA CCGGCACCGT CACCTTCCTC
GCCGGCCAGA CCGAGGCCAC GGTCGCGGTC AATCTGATCA ACGATGGCGC GGTCGAGGCG
GGCGAGACCT TCGGCCTCGC CGTCACCGGC GCCCATGGCG TGCCCGCCGC CACCGGCACG
GCCGAGATCC TGAACGACGA CGGGCCGGTG CCGGTGATCT CGGTCGAGGG CGACCGGGTG
GTCGAGGGCA GCTACCTCAC CTATACGATC CGGCTCTCCG AGCCCGCGAC CGACGCGGTG
AGCGTGGATT ACCAGTTCCG CTCGGGCACC GCGCTGCTCG ACGAGGATTT CTATTCCACC
GCCCCCTCGG GCACGCTCGT CTTCGCCCCC GGCGAGACGG TGCAGACCCT CCGCATCCGC
TCCTACAACG ACAGTCTCGA CGAGATCGAC GAGAGCTTCT TTCTCGAGCT GAGCGAACCG
CAGGGCGCGC GGTTCGGCGC CAACATCTCG ACCCTCATCA CGACGGGCTG GGTGATCGAC
AATGACGGCG TGGGGGTGAA CCGGGCGCTG GCCGTCTCGA ACCCCGTGGT GACCGAGGCC
GCGGGCGGGC AGGCGCTCTT CACCCTCACG CTGTCGGAGG CCTTCACCAC CGACCGCAGC
TTCACCTACA CGACCCATGA CGGGTCGGCC CGGGCGGGCG CGGATTATGT CGCCCGCACC
GGCACCGTCA CCTTCCTCGC CGGCCAGACC GAGGCCACGG TCGCGGTCAA TCTGATCAAC
GATGGCGCCG TCGAGGCGGG CGAGACCTTC GGCCTCGCGG TCACCGGCGC CCATGGTGTG
CCCGCCGCCA CCGGCACGGC CGAGATCCTG AATGACGACG GGGCGGTGCC GGTGATCTCG
GTCGAAGGCG ACCGGGTGGT CGAGGGCAGC TACCTCACCT ATACGATCCG GCTCTCGGAA
CCCGCGACCG ACGCGGTGAG CGTGGATTAC CAGTTCCGCT CGGGCACCGC GCTGCTCGAC
GAGGATTTCT ATTCCACCGC CCCCTCGGGC ACGCTCACCT TCGCGCCCGG CGAGACGGTG
CAGACCCTCC GCATCCGCTC CTACAACGAC AGTCTCGACG AGATCGACGA GAGCTTCTTT
CTCGATCTGA GCGATCCCCG CGGCGCGCAG TTCGGCGGCG GCAACCGCGC GCTGTCCACC
GGCGGCTGGG TGCTCGACAA TGACGGGGTG GGGCTGAACC GCTCGGTCTC GGTCGGCCAT
GCCACGCTGC AGGAAGGGCC CGGCGGCCGG GTCGCGGTCT TCGTGGTCGA GCTTTCGGCC
GCCTCGGCCG AGCGGATCGC CATCGGCTTC CAGACCCTCG CCGGGACGGC CCGCCCGGGC
AGCGACTTCG CCGCCCGGTC GGGCGAGGTG GTCTTCCTGC CCGGCCAGAC CCGGGCCGAA
ATTCTCATCC CCATCCTCGA CGATCTCGTG CTCGAGAATA CCGAGAGCTT CAGCCTGCGC
CTCGTGCCGC CCTTCCCCAG CGCCATCTCC TCGGCCACGC CGGTGCCGGT GGGGGTGGCC
ACCCTCCTCG ACGGCACGCT CCGCGGCTCG GGCGGCAACG ACCGGCTGAT CGGCACGGCC
AATGCCGAGC GGATCGAGGG GTTCGGCGGC AACGACCGGA TCGAGGGCCG GGGCGGCAAT
GACCTTCTGT CGGGCGGCGC GGGCAACGAC CTGCTCGACG GCGGCGGCGG ACGCGACCGG
ATGGTGGGGG GCACGGGCAA CGACCGCTAT ATCGTCAACC ATGCCGGGGA CAGCACGATC
GAGCTGGCCG GGGGTGGCAT CGACACGGTG CAGAGCAGCC TCTCCTGGAC TCTGGCCGCC
AATGTCGAGC GGCTGGTGCT GACCGGCGGG GCTGCCCTGT CGGGCACCGG CAACGGGCTT
GCGAACCTGC TCACCGGCAA TGGCGGCGCG AACCGGCTGC AGGGGCTTGC CGGCAACGAC
ACGCTGAACG GCGGCGGCGG GCGCGACGTC ATGATCGGCG GGACGGGCAA CGACACCTAC
ATCACCGATG GCGGCGACAC GATCGTGGAG CGCGCGGGCC AGGGGGTGGA TGTGGTGCGC
GCCTCGGTCA GCTACACGCT GGGCGCCCAG CTCGAGACGC TGGTGCTGAC GGGCACGGCG
AACCTTTCGG GGACCGGCAA TGGGCTTTCG AACCTGCTGA TCGGCAATGG CGGCGCGAAC
CGGCTGAGCG GCGGCGCCGG CAACGACACG CTGAGCGGCG GCGGCGGGGC GGATCTGCTG
ATCGGCGGCG CCGGGCGCGA CAGCTTTGTC TTCAACACCC GCCCCGGGCC CGGCGCGATC
GACCGGATCG CGGATTTCAA CGTGGCCGAC GACGTGATCC ATCTGGAAAA TGCGGTGTTC
CGCGGCCTTC CGGCGGGGGC GCTGCGCGGG GCGGCCTTTG CCTCCAACCT CTCGGGACAG
GCCACCGATG CGGCCGACCG GATCCTCTAT GAGCGCGACA CCGGGGCGCT CTGGTTCGAT
GCCGACGGCA CCGGAGGGGG CGCGCGGGTG CAGATCGCGA CCCTCTCGGC GGGGCTCGGC
CTGACGGCCG CGGATTTCTT CGTGATCTGA
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| Protein sequence | MAILPTFSVT STPVVEGNYL TYTIRLSEPA PDAVSVDYLF RSGTALLDED FYSTAPSGTL
VFAPGETVLT LQIRSYNDRL DETDESFFLE LSDPQGAQFG ANISTLVTAG WVIDDDGVGV
NRALAVSNPV VTEAAGGQAL FTLTLSEAFT TDRSFTYTTH DGSARAGADY VARTGTVTFL
AGQTEATVAV NLINDGAVEA GETFGLAVTG AHGVPAATGT AEILNDDGPV PVISVEGDRV
VEGSYLTYTI RLSEPATDAV SVDYQFRSGT ALLDEDFYST APSGTLVFAP GETVQTLRIR
SYNDSLDEID ESFFLELSEP QGARFGANIS TLITTGWVID NDGVGVNRAL AVSNPVVTEA
AGGQALFTLT LSEAFTTDRS FTYTTHDGSA RAGADYVART GTVTFLAGQT EATVAVNLIN
DGAVEAGETF GLAVTGAHGV PAATGTAEIL NDDGAVPVIS VEGDRVVEGS YLTYTIRLSE
PATDAVSVDY QFRSGTALLD EDFYSTAPSG TLTFAPGETV QTLRIRSYND SLDEIDESFF
LDLSDPRGAQ FGGGNRALST GGWVLDNDGV GLNRSVSVGH ATLQEGPGGR VAVFVVELSA
ASAERIAIGF QTLAGTARPG SDFAARSGEV VFLPGQTRAE ILIPILDDLV LENTESFSLR
LVPPFPSAIS SATPVPVGVA TLLDGTLRGS GGNDRLIGTA NAERIEGFGG NDRIEGRGGN
DLLSGGAGND LLDGGGGRDR MVGGTGNDRY IVNHAGDSTI ELAGGGIDTV QSSLSWTLAA
NVERLVLTGG AALSGTGNGL ANLLTGNGGA NRLQGLAGND TLNGGGGRDV MIGGTGNDTY
ITDGGDTIVE RAGQGVDVVR ASVSYTLGAQ LETLVLTGTA NLSGTGNGLS NLLIGNGGAN
RLSGGAGNDT LSGGGGADLL IGGAGRDSFV FNTRPGPGAI DRIADFNVAD DVIHLENAVF
RGLPAGALRG AAFASNLSGQ ATDAADRILY ERDTGALWFD ADGTGGGARV QIATLSAGLG
LTAADFFVI
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