Gene Rsph17029_4176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_4176 
Symbol 
ID4894987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009040 
Strand
Start bp111844 
End bp112470 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content72% 
IMG OID640110567 
ProductFMN-binding negative transcriptional regulator 
Protein accessionYP_001041879 
Protein GI126464903 
COG category[K] Transcription 
COG ID[COG2808] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones84 
Plasmid unclonability p-value0.00181829 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones86 
Fosmid unclonability p-value0.167994 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATACGC CTGCCGCCTT CCGCATGGAG GAGCTGCCCG ATCTGCACGC GGCGATGCGC 
GCCGCGGGCC TCGCCACCTT CGTGACCGGC ACCGGCGCGG GCCTCATGGC CACCCCGCTG
CCGCTGTTCC TCGCCCCCGA CGAGGGGCCG CTCGGCACGC TCTACGGTCA CCTCGCGCGG
GCCAATCCGC AGCGGGCCGA GCCGCCCACC TGCGAGGCGC TGGCGATCTT CGGCGGGGCC
GACGCCTATG TCACCCCGGC CTGGTATGCG ACGAAGCGCG AGACCGGGCG GGTGGTGCCG
ACCTGGAACT ATGTGGCCGT CCATGCCTAT GGCACGCCCG ACTTCTTCGA GGATGCAACG
CGGCTGCACG CGGTGGTGAG CCGCCTGACG GATCTGCACG AGGCCGCCCG ACCCGACCCC
TGGGCGGTGA CGGATGCGCC CGACCCCTAT ATCCGCAGCC AGCTGAAGGG CATCGTCGGC
CTCCGCCTGC CGATCGCGCG GATCGAGGGC AAACGGAAGA TGAGCCAGAA CCGCAGCGCG
GAAGACCGCG CCGGCGTCGC GGCAGGGTTA GGGGAAAGCG ACCGCCCCGG CGACCGGGCG
GCGGCAGGAC TGGTGCCGCT GGACTAG
 
Protein sequence
MYTPAAFRME ELPDLHAAMR AAGLATFVTG TGAGLMATPL PLFLAPDEGP LGTLYGHLAR 
ANPQRAEPPT CEALAIFGGA DAYVTPAWYA TKRETGRVVP TWNYVAVHAY GTPDFFEDAT
RLHAVVSRLT DLHEAARPDP WAVTDAPDPY IRSQLKGIVG LRLPIARIEG KRKMSQNRSA
EDRAGVAAGL GESDRPGDRA AAGLVPLD