Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_4176 |
Symbol | |
ID | 4894987 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009040 |
Strand | - |
Start bp | 111844 |
End bp | 112470 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640110567 |
Product | FMN-binding negative transcriptional regulator |
Protein accession | YP_001041879 |
Protein GI | 126464903 |
COG category | [K] Transcription |
COG ID | [COG2808] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 84 |
Plasmid unclonability p-value | 0.00181829 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 86 |
Fosmid unclonability p-value | 0.167994 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATACGC CTGCCGCCTT CCGCATGGAG GAGCTGCCCG ATCTGCACGC GGCGATGCGC GCCGCGGGCC TCGCCACCTT CGTGACCGGC ACCGGCGCGG GCCTCATGGC CACCCCGCTG CCGCTGTTCC TCGCCCCCGA CGAGGGGCCG CTCGGCACGC TCTACGGTCA CCTCGCGCGG GCCAATCCGC AGCGGGCCGA GCCGCCCACC TGCGAGGCGC TGGCGATCTT CGGCGGGGCC GACGCCTATG TCACCCCGGC CTGGTATGCG ACGAAGCGCG AGACCGGGCG GGTGGTGCCG ACCTGGAACT ATGTGGCCGT CCATGCCTAT GGCACGCCCG ACTTCTTCGA GGATGCAACG CGGCTGCACG CGGTGGTGAG CCGCCTGACG GATCTGCACG AGGCCGCCCG ACCCGACCCC TGGGCGGTGA CGGATGCGCC CGACCCCTAT ATCCGCAGCC AGCTGAAGGG CATCGTCGGC CTCCGCCTGC CGATCGCGCG GATCGAGGGC AAACGGAAGA TGAGCCAGAA CCGCAGCGCG GAAGACCGCG CCGGCGTCGC GGCAGGGTTA GGGGAAAGCG ACCGCCCCGG CGACCGGGCG GCGGCAGGAC TGGTGCCGCT GGACTAG
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Protein sequence | MYTPAAFRME ELPDLHAAMR AAGLATFVTG TGAGLMATPL PLFLAPDEGP LGTLYGHLAR ANPQRAEPPT CEALAIFGGA DAYVTPAWYA TKRETGRVVP TWNYVAVHAY GTPDFFEDAT RLHAVVSRLT DLHEAARPDP WAVTDAPDPY IRSQLKGIVG LRLPIARIEG KRKMSQNRSA EDRAGVAAGL GESDRPGDRA AAGLVPLD
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