Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_4165 |
Symbol | |
ID | 4894985 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009040 |
Strand | + |
Start bp | 102540 |
End bp | 103238 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | 640110556 |
Product | GntR domain-containing protein |
Protein accession | YP_001041868 |
Protein GI | 126464892 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 89 |
Plasmid unclonability p-value | 0.0218155 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 84 |
Fosmid unclonability p-value | 0.105526 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGACGGC AGGAGGCGCG GGACCGGCTC TGGCGGATCC TCGAGGAGCG GGCGCCGGCC GCGGGCGACC GGCTGCCGCC CGAGCGCGCG CTCAAGGATC TGGTGGGCTG CAGCCGCGAG ACGCTCCGGA CGGCGCTGGC CGCGCTCGAG GCCGAGGGGC GGATCTGGCG CCATGTGGGA CAGGGCACCT TCCGCGGCCG GGCGCCGCTC GGCCGGCCGG TGCGGGACGC GCTGCTGCTC GAGGCGGCGA CGCCCGCCGA TCTGATGGAT GCGCGGCGGC TGCTCGAGCC GCCGGTGGCG GCGGCGGCCG CGGCGCGGCG GAGCGCCGAG GATGTGGCGC TCCTGCGGCG GCGGCTGGCC GAGGGGCGGG CCGCGCGCGA CCGGGCCGCC TGCGAGCGGG CCGACGACGC CTTCCACCGC GCCATCGCCG AGGTGGCGCG CAACCCGCTG CTGATCGCGC TCCTGCGGCA TTTCTCGGGT GCGCGCTGCC GGGCGGTCTG GCAGCGGGAA TGGGACCGGA CCTACCGCCG GGTGGGGGTC GAGGAATTCA CCCATGCCCA TGTCGACCAG CATGCCCGGG TGGTCGAGGC CATTGCCGCG GGCGACGGGC CGGCCGCGCA CCGGGCGATG GCCACCCATC TGGCCACGAT CTGCGCCGCC ATGGGCCTGC CGCCGGCCCC GGAGGCGGCG GAGGGCTGA
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Protein sequence | MGRQEARDRL WRILEERAPA AGDRLPPERA LKDLVGCSRE TLRTALAALE AEGRIWRHVG QGTFRGRAPL GRPVRDALLL EAATPADLMD ARRLLEPPVA AAAAARRSAE DVALLRRRLA EGRAARDRAA CERADDAFHR AIAEVARNPL LIALLRHFSG ARCRAVWQRE WDRTYRRVGV EEFTHAHVDQ HARVVEAIAA GDGPAAHRAM ATHLATICAA MGLPPAPEAA EG
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