Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_4153 |
Symbol | |
ID | 4894951 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009040 |
Strand | - |
Start bp | 90401 |
End bp | 91582 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640110544 |
Product | mandelate racemase/muconate lactonizing protein |
Protein accession | YP_001041856 |
Protein GI | 126464880 |
COG category | [M] Cell wall/membrane/envelope biogenesis [R] General function prediction only |
COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 124 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 99 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACATCCA CCGCCTTCGC CCCGCGCAGC CTTGCGCCGG CCCGCATCAC TGCCGTGCGC GTCGCCCCCC TGCTGGGCGA GAGTCCGCAG GGCGGGTGGA GCCATGAGAT CAAGGCGGAC GACAGCGTGC ATGCGCTGAT CGCACTGCAC ACGGATGCCG GCATCTCGGG CTATGGCAGC GTCTTCACCA ACGGTGCGCT GGTACAGGCG GCGGCGGATG TTCTGACACC GCTGCTGCTG GGCGAGAATG CGCTGGAACC CGACCGCATC GCCGAGAAAC TGCACCAGAA CACCTTCTGG ATGGGGCGCG GTGGCTCGAT CACCCACACG ATCAGCGGCA TCGATATCGC CATGTGGGAC ATCCTTGGCC AGGCCACCGG CCTGTCGGTG GGGCGGCTCC TGGGCGGGCG GCACCGCGAC CGGGTGCAGC CCTACTGCTC GCTGCTGATG GACATGCCCG AGCGGATGGA AGCGGTGATC GCCCCGCACC GCGCGGCGGG GTTCCGCGCC TTCAAGATCG GCTGGGGGCC GTTCGGCCGG CGCGGCGATG CCGGGCTCGA CCGCGCCATC ATCGACGCGG CCCGCACCGC GGTCGGGGCG GATGCCCAGC TTCTTGTCGA TGCCGGGGCC TCGGATGCCT ATTGGCCGAA CGGTCTGAAA TGGGCGATGA ACACCGCCGC CATGCTGGCC GACTACGATG TCGGCTGGTT CGAGGAAGCG CTGCCGCCCG ATGCGATCGA GGATTTCATC GCCTTGCGTC GTATGAGCCC GGTGCCGATC GCCGGCGGCG AGGTGCTGAC GCGGCGCCAG AGCTTTGCCC CCTGGCTGGT GCGCGGCGCC TTCGACATCG TGCAGCCCGA TGTGACCAAG GTCGGCGGCA TCAGCGAGCA GCGCCGCATC GCCTGGATGG CGCGCGATTT CGGCATCCGC TACGTGGGCC ACGGCTGGAA CACCGCCTTC GGTCTGGCGG CCGATCTGCA GCTGGCCGCC GCCATGCCCG ACTGCACGCT GGTCGAATAT ATCGGCGGCT CGGCCTATGT CGACCGGCTG ACCACACGCC CCTTCGTCCT CGATGCCGAG GGCATGCTGG CGATCCCCGA TCTGCCCGGC CTCGGCGTCA GCCCCGATCC GGCATTGCTG GCGCGCTATA CGCCCGACCC GGAGAAATTC TTCAGCGCCT GA
|
Protein sequence | MTSTAFAPRS LAPARITAVR VAPLLGESPQ GGWSHEIKAD DSVHALIALH TDAGISGYGS VFTNGALVQA AADVLTPLLL GENALEPDRI AEKLHQNTFW MGRGGSITHT ISGIDIAMWD ILGQATGLSV GRLLGGRHRD RVQPYCSLLM DMPERMEAVI APHRAAGFRA FKIGWGPFGR RGDAGLDRAI IDAARTAVGA DAQLLVDAGA SDAYWPNGLK WAMNTAAMLA DYDVGWFEEA LPPDAIEDFI ALRRMSPVPI AGGEVLTRRQ SFAPWLVRGA FDIVQPDVTK VGGISEQRRI AWMARDFGIR YVGHGWNTAF GLAADLQLAA AMPDCTLVEY IGGSAYVDRL TTRPFVLDAE GMLAIPDLPG LGVSPDPALL ARYTPDPEKF FSA
|
| |