Gene Rsph17029_4142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_4142 
Symbol 
ID4894982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009040 
Strand
Start bp78760 
End bp79605 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content73% 
IMG OID640110534 
ProductUspA domain-containing protein 
Protein accessionYP_001041846 
Protein GI126464870 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones123 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones96 
Fosmid unclonability p-value0.976252 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACA GGATCATGGC ACTGGTGGAC GGCTCGGGCT TCTCGCGCAG CGTCTGCCTT 
CATGCGGCCT GGCTCGCGCA GAGGCTGGGG CTTCCGGTGG ACCTGCTGCA TGTGCTGGGC
CGCCGCGAGG CCGCCGATCG GGGCGATCTG TCGGGCGCGC TGCAGCTCGG CGCCCGCACC
GCCCTGCTCG AGGAACTGGC CGCGCTCGAT GCCGAACGGG CGCGGCTCGC GCAGGCGCAG
GGTCGGGCAA TCCTCGAGGA TGCGCAGGCG ATCCTCGCTG CCCACGGCGT CGAGGCCACG
CCCCATCTGC GGCAGGGAGA CCTGATCGAC ACGGTGGCCG GGTTCGAGCG CTCGGGGCGG
GCGCTGGTGG TGGGCAGGCG CGGCAGGGCC GCGGGCTTCG CCAGCGCCCA TCTCGGCTCC
AATCTCGAAC GCCTGCTGCG CGCGGCGAAG GTGCCGGTCC TCATCGTGCC CGCGGACTGG
CGGCCGGTGC GCAAGGTGCT GGTGGCCTAT GACGGCGGCA CAAGCGCCCG CGTGGCGATC
GAGCGGATGG CGGCAAGCCC GGTCTTCCGC GGCCTTGCGA TCACGCTGGC CTGCGCGGGC
GGCGAGGAGG CCCGCGCAAC GCTCGAGCGC GCCCGCGGCA CGCTGCTGGC CGCGGGGCTG
GCGGCCGAGA CCTGCCTCCT GTCCGGCGCG CCCGAGGAGG CGCTCGAGCG GAAGATCGAG
GCCGAGGGCT TCGACCTTCT GGTGATGGGC GCTTATGGCC ACAGCCGCAT CCGCACCCTG
ATCATCGGCT CGACCACCAC CGCCCTGATC CGCGCCTGCA CGGTCCCGAT GCTCGTCTAC
CGCTGA
 
Protein sequence
MTDRIMALVD GSGFSRSVCL HAAWLAQRLG LPVDLLHVLG RREAADRGDL SGALQLGART 
ALLEELAALD AERARLAQAQ GRAILEDAQA ILAAHGVEAT PHLRQGDLID TVAGFERSGR
ALVVGRRGRA AGFASAHLGS NLERLLRAAK VPVLIVPADW RPVRKVLVAY DGGTSARVAI
ERMAASPVFR GLAITLACAG GEEARATLER ARGTLLAAGL AAETCLLSGA PEEALERKIE
AEGFDLLVMG AYGHSRIRTL IIGSTTTALI RACTVPMLVY R