Gene Rsph17029_4133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_4133 
Symbol 
ID4894978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009040 
Strand
Start bp73579 
End bp74211 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content64% 
IMG OID640110526 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_001041838 
Protein GI126464862 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones146 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones106 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGTTG CAACTGCATT GCTGAGCTTT TCCATTGCAG CGGCTTTGCT GACGATCACA 
CCGGGGCTCG ATACAGCCCT CGTTCTGCGG ACGGCGGCGG TCGAGGGGCC GCGCCGGGCG
ATGCTGGCGG GGGCAGGGGT GGTGACCGGG GTGCTGGCAT GGGGATTGAT TGCGGCTTTG
GGGCTCGGTG CTGTGCTGGC CGTGTCGGAA CTGGCTTACC GTTGTCTTCA GCTTGCCGGC
GCGGCCTACC TGATCTGGCT GGGTATCGGG ATGTTGCGGG GAGCGTTGCG TGCGCGAGAG
CCGGGCCTGC CCAAGGTCAT GGCGCCTTCC GCACCAAATT GGTTCCTGCG CGGGGTAATG
ACCAACCTTC TTAACCCCAA GGTCGGTGTC TTCTATATCA GCTTCCTGCC GCAGTTTCTG
CCCGTGGGCG TTTCGGTGGT GCCGTTCAGC GTCCTGCTCG CGGGGATACA CGCGTCGATG
GGGCTGATCT TTTTTGCAGC GCTGACTGCC GCGACAGTGC CGTTTCAGAA TGCCCTGAAC
GGCCCTCGCC TGCCTCGGCT CCTCGACGGG GTCACCGGCA GTGTCTTGAT CGGGTTCGCC
CTGCGACTGC TGACGGAGCG GCGCGTGGGA TGA
 
Protein sequence
MDVATALLSF SIAAALLTIT PGLDTALVLR TAAVEGPRRA MLAGAGVVTG VLAWGLIAAL 
GLGAVLAVSE LAYRCLQLAG AAYLIWLGIG MLRGALRARE PGLPKVMAPS APNWFLRGVM
TNLLNPKVGV FYISFLPQFL PVGVSVVPFS VLLAGIHASM GLIFFAALTA ATVPFQNALN
GPRLPRLLDG VTGSVLIGFA LRLLTERRVG