Gene Rsph17029_4100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_4100 
Symbol 
ID4895033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009040 
Strand
Start bp43111 
End bp43794 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content70% 
IMG OID640110502 
ProductF0F1 ATP synthase subunit A 
Protein accessionYP_001041814 
Protein GI126464838 
COG category[C] Energy production and conversion 
COG ID[COG0356] F0F1-type ATP synthase, subunit a 
TIGRFAM ID[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) 


Plasmid Coverage information

Num covering plasmid clones66 
Plasmid unclonability p-value0.00000342736 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones109 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAGA GCCCGCTTGC CGAACGCATC GCCTTCACCC TCGGGCCGCT GGCCGTCAGC 
GAGACGGTGG TGGTGACCTG GGGCGTCATG GCGGTGCTGG CGCTCGGCTC TTGGGCTGTC
ACGCGGCGGC TCGCGCTCGT GCCCGGGCGG GGGCAGGCGG CGCTGGAGCT TGTGGTGACC
GCGCTCGATG CGCAGATCCT CTCGACCCTC GCGGGCGATC CGGGCCGGGT CCGGGCGCTG
ATCGGCACGC TGCTTCTCTT CGTGCTGACC TGCAACTGGT CCTCGCTGAT CCCGGGCGTC
GAGCCGCCGA CCGCGCATCT GGAAACCGAC GCGGCGCTGG CGCTGATCGT GTTCCTGACC
ACCATCGGCT TCGGCATCCG CGCGCAGGGG CTTTGGGGAT GGCTCCGCGC CTTCGCCCGG
CCGACCTGGG CCATGATCCC GCTCAATCTC GTCGAGCAGA TCACCCGCTC CGTCTCGCTC
ATGCTGCGCC TCTTCGGCAA TGTCATGAGC GGGGTCTTCG TCCTAGGCAT CGTGCTCTCG
CTCGCGGGGC TTCTGGTGCC GATCCCGCTG ATGGCGCTCG ATCTGCTGAC CGGCGCCGTG
CAGGCCTATA TCTTCGCCAT CCTCGCGCTC GTGTTCATCG CGAGCGCCGT GGAGGACGGC
GCCGCAGAGG AGACCGCCCC GTGA
 
Protein sequence
MIESPLAERI AFTLGPLAVS ETVVVTWGVM AVLALGSWAV TRRLALVPGR GQAALELVVT 
ALDAQILSTL AGDPGRVRAL IGTLLLFVLT CNWSSLIPGV EPPTAHLETD AALALIVFLT
TIGFGIRAQG LWGWLRAFAR PTWAMIPLNL VEQITRSVSL MLRLFGNVMS GVFVLGIVLS
LAGLLVPIPL MALDLLTGAV QAYIFAILAL VFIASAVEDG AAEETAP