Gene Rsph17029_4081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_4081 
Symbol 
ID4895007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009040 
Strand
Start bp18401 
End bp19363 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content70% 
IMG OID640110483 
Producthypothetical protein 
Protein accessionYP_001041795 
Protein GI126464819 
COG category[L] Replication, recombination and repair 
COG ID[COG5534] Plasmid replication initiator protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones104 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones87 
Fosmid unclonability p-value0.23652 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGACT TCTTCATCTG CGACATCCTC GATGCCCTGC CCAAGGACGA CATGGCCTCG 
ATGGAGCATC CGGTCTTCTC GCTCGCGACC CGCCCCGACC TGCGCGTGCT CGACTATGCC
CACAACGGGG TCAGGATCAC CGTGACCCCT TCCGTGCGGG GGCTCGCCAC CCTCTTCGAC
AAGGACATCC TGATCTACTG CGTGAGCCAG CTCATGGCCG CGCTGAACGC CGGGCGCGCC
ATCAGCCGGA CGCTGCATCT GACCGCGCAC GACCTGATGA CGGCCACCCA CCGCGAGACC
AGCGGCGACG GCTACCAGCG GCTGCGCGAG GCCTTCGAGC GGCTGGCGGG CACGCGCATC
ACCACCAACA TGGAGGTGGG CGGGCGCGAG ATCACCACGG GCTTCGGCCT GATCGAGAGC
TGGCAGATCG TGCGCCGCAG CCGCGGCGGG CGCATGGTGC AGGTGATGGT GACGCTGTCG
GAATGGCTGT TCCAGGCGGT GCTCACGAAA TCGGTGCTCA CCCTCAGCCG CGACTATTTC
CGGCTCAGAA AGCCGCTCGA GCGGCGGATC TACGAACTCG CCCGCAAGCA CTGCGGCCAG
CAGCCCGAAT GGCGGGTCTC GATCGCGACG CTCGCCAAGA AGTCGGGCTC GGCCTCGCCG
CTGCGGGTCT TCCGCAAGAT GATCCGCGAC ATGATCGCGG CCGACAGCCT GCCGGGCTAC
AGCCTCGCCG AGGAGCCGGG CGACCTGCTC TGCGTCACCC GCCGCGCGGC GGTGCTGGCG
CCGGGCCTCG CGCCCGCGCT GCGCGACACC ACGCTCGAGC GGGTGCGGGC GCGGATGCCG
GGCTGGGACG TCCATGCGCT GGTGGCCGAA TGGCACGCCT TCTGGCACTC GAGCGGCCAG
CCCCGGCTGA GATCCGCCGA TGCGGCCTTC CTCGGCTGGA TCGAGCGTCG GGTGCCGGGC
TGA
 
Protein sequence
MADFFICDIL DALPKDDMAS MEHPVFSLAT RPDLRVLDYA HNGVRITVTP SVRGLATLFD 
KDILIYCVSQ LMAALNAGRA ISRTLHLTAH DLMTATHRET SGDGYQRLRE AFERLAGTRI
TTNMEVGGRE ITTGFGLIES WQIVRRSRGG RMVQVMVTLS EWLFQAVLTK SVLTLSRDYF
RLRKPLERRI YELARKHCGQ QPEWRVSIAT LAKKSGSASP LRVFRKMIRD MIAADSLPGY
SLAEEPGDLL CVTRRAAVLA PGLAPALRDT TLERVRARMP GWDVHALVAE WHAFWHSSGQ
PRLRSADAAF LGWIERRVPG