| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_4073 |
|---|
| Symbol | |
|---|
| ID | 4894991 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009040 |
|---|
| Strand | - |
|---|
| Start bp | 11118 |
|---|
| End bp | 11954 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640110475 |
|---|
| Product | 2-dehydro-3-deoxyphosphooctonate aldolase |
|---|
| Protein accession | YP_001041787 |
|---|
| Protein GI | 126464811 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR01362] 3-deoxy-8-phosphooctulonate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 91 |
|---|
| Plasmid unclonability p-value | 0.0636922 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 86 |
|---|
| Fosmid unclonability p-value | 0.189954 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGAGA CGCCCACCAT CGTGACCATC GGCGACATCG CCATCGGGGG CGGCCATCCG
ATCGCGCTCA TCACCGGGCC CTGCCAGCTC GAGAGCCTCG ATCATGCCCG CATGATGGCC
GAGCGCATCG CCGAGGCCTG CGCCCCCACC GGAACGAAGT TCATCTTCAA GGCGAGCTAC
GACAAGGCCA ACCGCTCGTC GCTCTCGACG GCGCGGGGCC TCGGGATGGA GAAGGGGCTC
GAGATCCTCG GCCGGATCCG CGAGGAGTTC GGCGTGCCGG TCCTGACCGA CGTCCATGAG
CCCGGCCATT GCGCGACGGC CGCCGAGGTC TGCGACGTGC TGCAGATCCC GGCCTTCCTC
TGCCGGCAGA CCGACCTTCT GCTGGCGGCG GGCGAGACCG GCCGCGCGGT CAACGTCAAG
AAGGGCCAGT TCCTCGCGCC CTGGGACATG AAGAACGTGG CCGACAAGGT GGCCTCGACC
GGCAACCGGC GGATCCTGCT CTGCGAGCGG GGCACCTCCT TCGGCTACAA CACCCTCGTG
ACCGATTTCC GCGGCCTGCC GACCATGGCC GCGACCGGCT GGCCCGTGGT GTTCGACGCC
ACCCATTCGG TGCAGCAGCC GGGGGGCCTC GGCGGCTCCT CGGGCGGGCA GCGCGAATTC
GCCCCGGTGC TCGCGCGGGC GGCCTGCGCG GTGGGGGTCT CGGCGCTCTT CATCGAGACG
CACGAGGATC CCGACCGCGC GCCCTCCGAC GGGCCGAACA TGATCCCGGT GGACCGGATG
GGCCGGCTCA TCGCCGATCT CTGCGCCTTC GACGCGCTGG CCAAGTCGCT CGCCTGA
|
|---|
| Protein sequence | MTETPTIVTI GDIAIGGGHP IALITGPCQL ESLDHARMMA ERIAEACAPT GTKFIFKASY
DKANRSSLST ARGLGMEKGL EILGRIREEF GVPVLTDVHE PGHCATAAEV CDVLQIPAFL
CRQTDLLLAA GETGRAVNVK KGQFLAPWDM KNVADKVAST GNRRILLCER GTSFGYNTLV
TDFRGLPTMA ATGWPVVFDA THSVQQPGGL GGSSGGQREF APVLARAACA VGVSALFIET
HEDPDRAPSD GPNMIPVDRM GRLIADLCAF DALAKSLA
|
|---|
| |