| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_4464 |
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| Symbol | |
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| ID | 4841346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009037 |
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| Strand | + |
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| Start bp | 4255 |
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| End bp | 8472 |
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| Gene Length | 4218 bp |
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| Protein Length | 1405 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640110452 |
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| Product | DNA-directed RNA polymerase subunit beta' |
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| Protein accession | YP_001041764 |
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| Protein GI | 126090321 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAGACT TATTAAAGTT TCTGAAACAG CAAAGCAAGA CTGAAGAATT TAACGGCATC
AAAATTGGTC TGGCATCGCC TGATCTGATC CGTTCTTGGT CTTTTGGTGA AGTTAAGAAG
CCAGAAACCA TCAACTACCG TACCTTCAAG CCTGAGCGTG AAGGTCTGTT CTGTGCGCGT
ATCTTTGGCC CAGTCAAAGA TTACGAATGT TTGTGCGGTA AGTACAAACG TTTGAAGCAC
CGTGGTGTTA TTTGTGAAAA GTGTGGCGTT GAAGTAACCC AAACTAAAGT ACGTCGTGAG
CGTATGGGTC ACATCGAACT GGCTAGCCCA GTTGCGCACA TTTGGTTCTT AAAATCGCTA
CCGTCACGTA TTGGCTTAAT GCTGGATATG ACGCTGCGTG ATATCGAACG CGTACTGTAT
TTTGAATCAT TTGTGGTGAT CGAGCCAGGC ATGACCAGCC TTGAACGTGG CCAAATGCTG
ACAGAAGAAA CTTATCTGGA TGCATTAGAA GAATACGGTG ATGAGTTCGA AGCTAAAATG
GGTGCCGAAG CAGTGCTTGA ACTGTTACGT GCTATCGATT TAGCGAAAGA AATCGAACAA
ATGCGTGAAG AATTACCTTC AATCAACTCT GAGACTCGTC GCAAGAAAGT GACTAAACGT
CTTAAGCTGA TGGAAGCATT CTACACTTCA GGCAACAAGC CTGAGTGGAT GATCTTAAAA
GTACTGCCTG TGTTACCACC TGACTTACGT CCGCTGGTAC CGCTTGATGG CGGCCGCTTC
GCGACTTCAG ATCTTAACGA CCTGTATCGC CGCGTGATCA ACCGTAACAA CCGTTTGAAG
CGTCTGTTAG ATTTAGCTGC GCCAGACATT ATCGTACGCA ACGAAAAGCG TATGTTACAA
GAATCTGTTG ATGCGCTATT AGATAACGGT CGTCGTGGTC GTGCTATTAC CGGTTCTAAC
AAGCGTCCCC TGAAATCTTT GGCCGATATG ATCAAAGGTA AGCAAGGTCG TTTCCGTCAG
AACTTATTGG GTAAGCGCGT CGACTATTCT GGTCGTTCGG TAATTACCGT AGGTCCTACT
CTACGTCTGC ACCAATGTGG TCTTCCTAAG AAGATGGCAC TGGAACTGTT CAAGCCATTC
ATCTATGGCA AGCTAGAAGG TCGTGGCTTA GCTACTACCA TCAAAGCAGC TAAGAAGATG
GTTGAGCGTG AAGTGGCGGA AGTATGGGAC GTTCTGGATG AAGTGATCCG CGAACATCCA
GTGATGCTCA ACCGTGCACC AACACTGCAC AGACTGGGTA TCCAAGCGTT CGAACCAGTA
CTGATTGAAG GTAAAGCAAT CCAGTTACAC CCACTCGTTT GTGCGGCATA CAACGCCGAC
TTCGACGGTG ACCAAATGGC GGTACACGTA CCGTTAACAC TGGAAGCGCA GCTTGAAGCC
CGTGCCCTGA TGATGTCTAC CAACAACATC CTGTCACCAG CCAACGGCGA GCCTGTTATC
ACACCGTCTC AAGACGTGGT ATTGGGTCTG TACTACACCA GCCGTGAGCG TATTAACGGC
CGTGGTGAAG GAATGGCATT TATGTCTGTT GCTGAAGTTG AAAAAGCTTA CGCAACTGGC
GCTGCTGAAC TGCATGCCCG CGTTAAAGTA CGTATCACTG AAACCATTAT TGGTGACACT
GGTGAACGTA CTGAACAACG CCGTATTGTT GATACGACTG TGGGTCGTGC TCTGCTGTCA
CTTATTCTGC CAGCAGGTTT GTCATTTGAT CTGGTTAACC AGAACATGGG CAAAAAGCAG
ATCTCTAAAC TGTTGAACAC TTGTTATCGT CAACTGGGTC TGAAAGATAC TGTTATCTTC
GCTGACCAAT TGATGTATAC CGGTTTCCGT TTTGCAACCA TTTCTGGTGC CTCTGTAGGT
ATCGATGACA TGGTTATTCC AGACGAGAAA TACACCTTAG TTGCTGATGC AGAAGCGGAA
GTTCTTGAAA TTCAAGAGCA GTTCCAATCT GGTCTAGTTA CAGCCGGTGA GCGTTACAAC
AAAGTTATCG ATATCTGGGC AAGTGCCAAC GAAAAAGTTT CTAAAGCTAT GATGGAAAAC
CTGTCAACTG AGACAGTGAT TAACCGTGAT GGTGTTGAAG AGAAACAAGC CTCGTTTAAC
AGTATCTATA TGATGGCTGA CTCAGGCGCT CGTGGTAGTG CCGCACAGAT CCGTCAGTTG
GCGGGTATGC GTGGTCTGAT GGCTAAGCCA GATGGCTCAA TCATCGAAAC GCCAATTACC
GCTAACTTCC GTGAAGGTCT AAACGTACTC CAGTACTTTA TTTCTACTCA CGGTGCGCGT
AAAGGTCTAG CCGATACGGC ATTGAAGACA GCGAACTCGG GTTACCTGAC TCGTCGTCTT
GTAGACGTTG CACAAGATTT AGTGGTTATC GAAGACGATT GTGGTACTCA CGAAGGTCTA
ACCATGAAAC CGCTGATTGA AGGTGGTGAT GTGGTTGAGC CGTTACGTGA ACGCGTACTG
GGTCGTGTGG TTGCGCTTGA TGTGTTCTAT CCAGGCACTG AAGACGTACT CGCACCACGT
AACACGCTAC TCGACGAAGC CTGGTGTGAC AAGTTAGAAG AATATTCAAT CGACGAAGTG
ATTGTACGTT CTGTTATTTC TTGTGATACC GATTTCGGTG TGTGTGCAGC CTGTTACGGT
CGTGACTTGG CTCGTGGTCA TATCATTAAC CACGGTGAAG CAATCGGTGT TGTGGCAGCA
CAGTCTATCG GTGAACCAGG TACACAGTTA ACGATGCGTA CGTTCCACAT CGGTGGTGCG
GCATCAAGAG CGTCTGCAGA AAACAATGTC CAAGTGAAAA ACTCGGGTTC ATTGAAACTG
CATAATGCTA AGCATGTTAC TAACAGTGAC GGCAAACTGG TTATCGTTTC TCGTTCTTCT
GAACTGGCCG TTATTGACGA GCTGGGTCGT GAGAAAGAGC GTTATAAAGT GCCATACGGT
ACTGTGCTCG AGAAGCTAGA AGAAGCAGCT GTTGAAGCGG GCGATGTTAT CGCTAACTGG
GATCCACATA CTCACCCAAT CATTTCTGAA GTGGCGGGTA GTATCAAGTT CGTAGACATG
ATTGACGGTG TCACTATGAC ACGTCAAACA GACGAACTAA CGGGTCTGTC ATCAATCGTG
ATCCTTGACG TTGGTCAGCG TGGTACTGCG GGTAAAGAAA TGCGCCCAAT GATCCGTCTG
CTTGGCGCTA ATGGTGCTGA CTTGATGATC CCTGGTACTG AAGTACCAGC ACAGTACTTC
TTACCTGGTA GTGCGATCGT TAACTTGGAA GATAACGCGC AAATCAACGT GGGTGACGCT
TTAGCTCGTA TTCCTCAGGA ATCGTCTAAA ACACGCGACA TCACCGGTGG TCTGCCACGC
GTTGCTGACT TGTTCGAAGC GCGTAAGCCA AAAGAGCCTG CTATTCTGGC GGAAATCTCT
GGTACCATCT CGTTTGGTAA AGAGACCAAA GGTAAGCGTC GTTTGGTGAT TACACCTGCT
GATGGCGGCG ATCATTATGA AGAGATGATC CCTAAGTGGC GTAACTTAAA CGTGTTCGAA
GGTGAAAAAG TCGAACGTGG TGAAGTTATC GCTGACGGTC CAGAAGCGGC ACACGACATT
CTGCGTCTTC GTGGTATCCA CAACGTAGCA AACTACATTG TGAACGAAGT ACAGGACGTT
TACCGTCTGC AAGGCGTGAA GATCAACGAT AAGCATATCG AAGTGATCAT CCGTCAAATG
CTGCGTAAGT GTCTTATCAC TTCTGCCGGT GACACTGACT TCCTCGAAGG GGAACAAGCT
GAAGTGTCAC GCGTGAAGAT CGCTAACCGC GAACTGATCG CCCAAGGTAA AGTGCCTGCG
ACTTTCGAAC GTGAACTACT GGGTATTACT AAAGCATCTC TGGCAACAGA ATCCTTTATC
TCAGCAGCAT CGTTCCAAGA AACTACGCGC GTACTGACCG AAGCTGCCGT AGGTGGTAAG
AGCGATCAAT TACGTGGTCT GAAAGAAAAC GTTATCGTTG GCCGACTGAT CCCAGCCGGT
ACTGGTTACG CTTATCATAA GACTCGTAAT GAAGCGCGTG CGAAGAAAAA CGAACCTGTA
GTAGTGAATA AGATCACTGC AAGTGAAGCC GAACAGAACT TGGCCGATCT CTTAAACCTG
GCTGGTAGCC AAGATTAA
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| Protein sequence | MKDLLKFLKQ QSKTEEFNGI KIGLASPDLI RSWSFGEVKK PETINYRTFK PEREGLFCAR
IFGPVKDYEC LCGKYKRLKH RGVICEKCGV EVTQTKVRRE RMGHIELASP VAHIWFLKSL
PSRIGLMLDM TLRDIERVLY FESFVVIEPG MTSLERGQML TEETYLDALE EYGDEFEAKM
GAEAVLELLR AIDLAKEIEQ MREELPSINS ETRRKKVTKR LKLMEAFYTS GNKPEWMILK
VLPVLPPDLR PLVPLDGGRF ATSDLNDLYR RVINRNNRLK RLLDLAAPDI IVRNEKRMLQ
ESVDALLDNG RRGRAITGSN KRPLKSLADM IKGKQGRFRQ NLLGKRVDYS GRSVITVGPT
LRLHQCGLPK KMALELFKPF IYGKLEGRGL ATTIKAAKKM VEREVAEVWD VLDEVIREHP
VMLNRAPTLH RLGIQAFEPV LIEGKAIQLH PLVCAAYNAD FDGDQMAVHV PLTLEAQLEA
RALMMSTNNI LSPANGEPVI TPSQDVVLGL YYTSRERING RGEGMAFMSV AEVEKAYATG
AAELHARVKV RITETIIGDT GERTEQRRIV DTTVGRALLS LILPAGLSFD LVNQNMGKKQ
ISKLLNTCYR QLGLKDTVIF ADQLMYTGFR FATISGASVG IDDMVIPDEK YTLVADAEAE
VLEIQEQFQS GLVTAGERYN KVIDIWASAN EKVSKAMMEN LSTETVINRD GVEEKQASFN
SIYMMADSGA RGSAAQIRQL AGMRGLMAKP DGSIIETPIT ANFREGLNVL QYFISTHGAR
KGLADTALKT ANSGYLTRRL VDVAQDLVVI EDDCGTHEGL TMKPLIEGGD VVEPLRERVL
GRVVALDVFY PGTEDVLAPR NTLLDEAWCD KLEEYSIDEV IVRSVISCDT DFGVCAACYG
RDLARGHIIN HGEAIGVVAA QSIGEPGTQL TMRTFHIGGA ASRASAENNV QVKNSGSLKL
HNAKHVTNSD GKLVIVSRSS ELAVIDELGR EKERYKVPYG TVLEKLEEAA VEAGDVIANW
DPHTHPIISE VAGSIKFVDM IDGVTMTRQT DELTGLSSIV ILDVGQRGTA GKEMRPMIRL
LGANGADLMI PGTEVPAQYF LPGSAIVNLE DNAQINVGDA LARIPQESSK TRDITGGLPR
VADLFEARKP KEPAILAEIS GTISFGKETK GKRRLVITPA DGGDHYEEMI PKWRNLNVFE
GEKVERGEVI ADGPEAAHDI LRLRGIHNVA NYIVNEVQDV YRLQGVKIND KHIEVIIRQM
LRKCLITSAG DTDFLEGEQA EVSRVKIANR ELIAQGKVPA TFERELLGIT KASLATESFI
SAASFQETTR VLTEAAVGGK SDQLRGLKEN VIVGRLIPAG TGYAYHKTRN EARAKKNEPV
VVNKITASEA EQNLADLLNL AGSQD
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