| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_4442 |
|---|
| Symbol | |
|---|
| ID | 4841272 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009036 |
|---|
| Strand | + |
|---|
| Start bp | 57901 |
|---|
| End bp | 58401 |
|---|
| Gene Length | 501 bp |
|---|
| Protein Length | 166 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640110434 |
|---|
| Product | transposase IS3/IS911 family protein |
|---|
| Protein accession | YP_001041746 |
|---|
| Protein GI | 126090291 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 108 |
|---|
| Plasmid unclonability p-value | 0.380307 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.586119 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCGGT ATTCACCAGA ACGTAAAGAG GCGATCCTTA AAAAATTATT ACCTCCTCAC
AACTTAACGG TCGCAGAGGT AGCTCGGGAA GAAGGCATAG CGGTGCAAAC CTTGTATCAT
TGGCGAGATA TAGCCAGAAA AGAAGGTCGC CCCGTGCCAG GAAAAACATT AACAGCCGAT
GATTGGTCTG CAGAAGCTAA GTTTGCGGTA CTCATTGAAA CTGCTCCGCT ATCAGAAGCA
GAAATAAGCC AGTATTGCCG TGAAAAAGGT TTGTACCGCG AACAAGTACA ACAGTGGAAG
TTGGAGTGCT TGTCTGGTTT TCAAACCTCA GAAGTACAAA CTAAAACCAT TAAACAGCAG
GCCAAGGCTG ACAAAGCCGA AATCAAATCG CTGCAACGGG AATTACGCTA CAAGGAGAAA
GCGTTGGCAG AAGCTGCCGC ATTACTGGTG CTCAGAAAAA AGCTCAATGT GCTCTGGGGG
GACGACAGCG AGGAGAGCTA A
|
|---|
| Protein sequence | MARYSPERKE AILKKLLPPH NLTVAEVARE EGIAVQTLYH WRDIARKEGR PVPGKTLTAD
DWSAEAKFAV LIETAPLSEA EISQYCREKG LYREQVQQWK LECLSGFQTS EVQTKTIKQQ
AKADKAEIKS LQRELRYKEK ALAEAAALLV LRKKLNVLWG DDSEES
|
|---|
| |