Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_4418 |
Symbol | |
ID | 4841269 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009036 |
Strand | - |
Start bp | 34066 |
End bp | 34707 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640110410 |
Product | putative phage repressor |
Protein accession | YP_001041722 |
Protein GI | 126090267 |
COG category | [K] Transcription |
COG ID | [COG2932] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 82 |
Plasmid unclonability p-value | 0.000888993 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.473724 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAA TAGGTCATAG AATAAAAACG AGACGCAAAC TAAAAGGGCT TACACAAGAA GCCCTAGGTT TGGCTGTAGG CGTAAGTAAA GTTTCTGTGT CTAGCTGGGA GCTAGGCAAG AATTCAATGC ATCCTGAATT GCTAAACAAA GTTGCTGGAG TGCTAGGTGT TGATGCTCAT TGGCTATTGA CTGGAGAGTC ATTTGCAACA TTAGAAGATG AAAAAGATAG TGTATTTTGG GCTCCGAAGT ATAAAAACAT AAAAGCCGCA GCGGGTGCAG GTTGTTGCCA TGATGATTGT TTGGATGAGG ATGAGGATGA GGTTCCTATT CCAATAAAGT TTGTTAAAAA CCAAACAAAT AAAGATCAAA TATTTTGCGT GTGTGTATCA GGTGATTCAA TGGAACCAGT TTTATCAGAT GGCTCTATTA TTGCCATGAA TAGTAGCGAT ACCATCATAA AAGATGGGAA AATGTATCTA GTTAAACAGG ATGATTTGTT ACGAGTGAAG GTTATACATT TGTTACCCAA AGACATGGTG CTAAAGAGTT ACAATCCGAA TTTTAAAGAT GAAACCTATA ATATAAAGAA AGATAATATC CAAATTTTGG GGCGTGTTTT TTGGTTCACA TCAGGAAGAT AG
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Protein sequence | MKKIGHRIKT RRKLKGLTQE ALGLAVGVSK VSVSSWELGK NSMHPELLNK VAGVLGVDAH WLLTGESFAT LEDEKDSVFW APKYKNIKAA AGAGCCHDDC LDEDEDEVPI PIKFVKNQTN KDQIFCVCVS GDSMEPVLSD GSIIAMNSSD TIIKDGKMYL VKQDDLLRVK VIHLLPKDMV LKSYNPNFKD ETYNIKKDNI QILGRVFWFT SGR
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