| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_4564 |
|---|
| Symbol | |
|---|
| ID | 4841229 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009035 |
|---|
| Strand | + |
|---|
| Start bp | 96788 |
|---|
| End bp | 100570 |
|---|
| Gene Length | 3783 bp |
|---|
| Protein Length | 1260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640110370 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001041682 |
|---|
| Protein GI | 126090201 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1330] Exonuclease V gamma subunit |
|---|
| TIGRFAM ID | [TIGR01450] exodeoxyribonuclease V, gamma subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTAAAGT TAATCCAGTC CAATCAGATG GAAGTGCTCT GCGCCCATTT AGCCGCTTAC
CTGACCCAAC GCCTTGCTTT TGCACGTCTA CTGAGTAACG AGCATATTCT GGTGCAGAGT
CCTGGCATGT CGACTTGGCT GCGCCTCGAA ATCGCCAAAC AAAATGGGAT TGCTGCCGCA
TTGGAATTTC CGCTGCCATC GAGCTTTACT TGGCAGTTGT GCCATGACTT ATTACCCGAT
GTGCCTAAGG ACAACGCCTT CACTAAGGCG GCGATGACGT GGAAGCTGAT GCAACTCTTG
CCGCGCATGT TACAAGATGA CACCTTTGGG CCATTGAGAC ACTATCTAGG TAATACCCTA
GAAAATACGC CTACCACAAA TACCGCCGAC ACAAGTGAAC ATTTCAACAT CAGTGATATG
ACGGCTGACG ACATTAAGCT GTACCAACTC TGTGGCCGGA TCGCCGATAT CTTCGACCAA
TACTTAGTGT ATCGCCCCGA TTGGATTTTA GCGTGGGAGC AAAACGAGCA TCCCGAATCA
CTTACCAAAT CGCTGAATGA AGACCAACGC TGGCAACCTA TTTTATGGCG CGCACTGATT
GCCTTTAACC GTGATGAGCT TAATCAAAGC CATTACCACA GAGCCAATCT GCACAGCGAC
TTAATTGCCG CGCTGAATAA TCCCGACACG TCACTCGCCA AATTGCCGCA ACGCTTATTT
GTGTTTGGCA TTTCCTCAAT GGCGCCGCAA ACCCTCGAAG TGCTTTACCA TCTGGCAGGA
CGTATCGATG TGATCGTGCT GGGTTTAAGC CCGTGTCAAC ACTATTGGGG CGACATTGTT
GATCCCCGTA ATCGTGCCCG CATGGCGGTG CAATATGCGG GTAAACGTCA ATTAGCAGAA
CTATGGGAAG ATAAACTCGA AGTAGGCAAT CCGCTGCTTG CCAATAACGG CAAGATGGGC
CGTGAATTAC TCGATATGCT GCTTGAGCTC CCCGCCGAAC ACTGCGACTT TGGCGACGAT
GTGTATTGTG AGCCCTGCGA CGATCCCAAC TCGCCACACA GTCATGCCAG CATGCTCCAC
GGGGTGCAAT ACGATATTTT AGAGATGCAA ACCTTAGACA GAGTGCTAGG GCCTGATGCC
GAGCTGTACC AAAATGTCAA GAACAGACGC CTGCTTAAGC GCGACGATGA ATCCATTCGA
GTCAAGAGTT GTCACAGTCC ACTGCGGGAA GTCGAAACCC TGCACGATCA CTTGCTTGAG
TTACTCAGTA ATGATGTAGA CCTGACACCC AAAGACATAG TGGTGATGAT GCCCGATGTC
GCCGCCTACG CGCCCTATAT CGATGCCGTC TTCTCGGCGA AGCAAGATCT GCATTACATT
CCCTACGCCA TTGCCGACCG AGGCGCAGCG CAGGAATCAC CGCTCATCAA TAGCTTTTTA
AATTTACTTG GAATTAATCA AAGTCGTTTT GGTCTGACCG ACATTTTGAG CATACTCGAA
GTGCCCGCCA TTTTGCGCCG TTTCCAGCTC GATGACGATG AATTGCAACT TATCCGCCGC
TGGTTAGATG AAGCGGGCGT GCGCTGGGGC CGCGATGAGC AAAGCCGCCT AAAACAAGGG
GTGCCAGCGT TTGAGCAAAA CTCCTGGGCC TTTGGTATTA AAAGGCTGAT TTTAGGTTAC
GCCTTGAGTG ACGATGCGCC GCTGTACCAA GACCATCTGA TCGTGACTGG CATCGAAGGC
CAATCGGCGC AGGCGTTAGG TAAGTTACTC AATTTTATTG AAGTACTCGA TGAAACAGCG
CAAATACTCG CCCTGCCGCA AGTGGGCGCC CTGCGTTTAG CGGAATTAAC TGATTTGCTG
GATGCCTTCT ACGACACAGA TGAAGACGAG CGCGAGCAGT TACAGGAAAT CCGCGATGCC
ATCGCCGCCC TAGAGCAAGA GTTACTATCT GCGGGTAAGC CATTGGATAC AAACTCGTTA
GATACAAGTA TGTTCGAGAA GCTAGCCCAA CAGAGCATAA GCGGACTGAG CCTCAGTATC
GAAGTGCTGC AGCAATGGTT TAATCAACGC TTAACCGAAT CTCGGGTCGG CCAGCGTTAT
CTTGCGGGAA GCGTGAACTT TTGTACCTTG ATGCCGATGC GCTCGATCCC CTTTAAGGTC
GTGTGTTTAC TCGGCATGAA TGATGGGGTG TATCCTAGGG TTCAGCATCC CGTCGGCTTT
GATTTAATGG CACACTTTGG TGCCCGTAAA GGCGATCGTT CCCGCCGTCT CGATGACAGA
TATTTGTTTT TAGAAGCCTT ATTGTCGGCG CGCGAGCAAC TGTACATCAG CTACATCGGT
CGCAGCGAAC GGGATAACTC TGAGCGTATC GCCTCTATGC TCGTCTCTGA ACTGATTGAA
TATTGTCAGC TGTGCTATTT GCCTGAAACA CTATTGGCTC AATCGCAGAA AGTTTCAAGC
CCCATAGACC CAGAGGATGC TGAAAAAGCC CTCTATAAAG CGATCGTCAG CCACCAGCCG
CTGCAACCCT TCGATCCTAA GTTGTATCAA GCCGCAGTAA AAAGTGATGA CGAAGATGGC
TCAAGCATAG GCCAAAGTTA CAGCCAGCAA TGGTGTCCGC CCAATGCGGC AGCGGCAGGC
ACACATGCGG GCCGCTTTAT CGGCGCGCAA ACTCGCATCC TGCTCGAAGC GGATGAGCAA
GACTCAATGC TACAGGCCGT TCCACTGCCC ACTCCTCAGC AGCAAAGCAA GCAAGTGGAT
GTGTCTGCCC TGATCCGTTT CTTTCGAAAT CCGGCGCAGT ACTTCTTCAA CCGCACGCTT
AAAGTCGATC TCAGCCTTAA TATTCAGGCC GATGATAATG ACGAGCCCTT TAGCTTAAAT
GCTCTAGAGC GCTATATGTT GCAGGCCCAG TTACTCGACG ATGCCATAAG CCAAGGTCTG
ACTGAGCCCG ATATCGAGCT GATTAAACGC CTCAAAGCCA GCGGCAGTTT GCCGATGCAG
CCCTTCGATG ATTTGCTGCT GCGCCAATAT CAGCACGATA TTAAGCCTTT GATTGGCAGA
ACCTTGTTCC TCAAGGGAGA ACAAGCCAGT AGTCATGCGG ATATTAAACT CCTGTTTGAC
TTGCCCATCA CGGCGGGCAA ATCCCAGCAA GTGTTACTGC AAGGCCGTAT CGATGACATC
AGCCCTAAGG GATTAGTGAA TTACCGTCCC GGTAGCGCCC ATGGTCGCGA TGTGCTGAGG
TTGTACCTTC GTCACCTGTG TTTAATGGCA ATGGGCCACA CACATGCAAG CTATCTACTC
GACATGGGGC ATTTCCACGC CTTAGCGCCA ATCACTGCTG AGCGCGCCCA TGCGTTACTG
GCCGATTTAT TGGTGCTGTT TTACCAAGGT CAGCAATATC CACTGTGTTT TATGCCGCGC
ACCTCACTGG CCTACGTCAG CTGCGAGGGT GAGCACGATG AGCGTTTGCA GCAAGCGTTA
CCTGAATGGC TGGATGAGCA GAGTCAATTA GGCGAAGGGA GCGAACCCCA TTACCAACGC
TTATTCAGTT TTCCGCGGGA TTTCTCTGAG GGCAGCTTTG GCGCATTTGC CGAGCGCATC
TGTCGCCCTA TGGTGAGTTT ATATCTCAAA GATACGCTGG CTCAGCTTGA GGAATTTGCG
CTGAACGATG GCATGAGCCA AGGCCAAACT CCCAATGTAC AAGCGACTGA AACGCAAGCG
ACTGAAACAC GAGCGACTGC AGCACATTTG AACCGCGATA GCGCACAGGG AGAGCAAGCA
TGA
|
|---|
| Protein sequence | MLKLIQSNQM EVLCAHLAAY LTQRLAFARL LSNEHILVQS PGMSTWLRLE IAKQNGIAAA
LEFPLPSSFT WQLCHDLLPD VPKDNAFTKA AMTWKLMQLL PRMLQDDTFG PLRHYLGNTL
ENTPTTNTAD TSEHFNISDM TADDIKLYQL CGRIADIFDQ YLVYRPDWIL AWEQNEHPES
LTKSLNEDQR WQPILWRALI AFNRDELNQS HYHRANLHSD LIAALNNPDT SLAKLPQRLF
VFGISSMAPQ TLEVLYHLAG RIDVIVLGLS PCQHYWGDIV DPRNRARMAV QYAGKRQLAE
LWEDKLEVGN PLLANNGKMG RELLDMLLEL PAEHCDFGDD VYCEPCDDPN SPHSHASMLH
GVQYDILEMQ TLDRVLGPDA ELYQNVKNRR LLKRDDESIR VKSCHSPLRE VETLHDHLLE
LLSNDVDLTP KDIVVMMPDV AAYAPYIDAV FSAKQDLHYI PYAIADRGAA QESPLINSFL
NLLGINQSRF GLTDILSILE VPAILRRFQL DDDELQLIRR WLDEAGVRWG RDEQSRLKQG
VPAFEQNSWA FGIKRLILGY ALSDDAPLYQ DHLIVTGIEG QSAQALGKLL NFIEVLDETA
QILALPQVGA LRLAELTDLL DAFYDTDEDE REQLQEIRDA IAALEQELLS AGKPLDTNSL
DTSMFEKLAQ QSISGLSLSI EVLQQWFNQR LTESRVGQRY LAGSVNFCTL MPMRSIPFKV
VCLLGMNDGV YPRVQHPVGF DLMAHFGARK GDRSRRLDDR YLFLEALLSA REQLYISYIG
RSERDNSERI ASMLVSELIE YCQLCYLPET LLAQSQKVSS PIDPEDAEKA LYKAIVSHQP
LQPFDPKLYQ AAVKSDDEDG SSIGQSYSQQ WCPPNAAAAG THAGRFIGAQ TRILLEADEQ
DSMLQAVPLP TPQQQSKQVD VSALIRFFRN PAQYFFNRTL KVDLSLNIQA DDNDEPFSLN
ALERYMLQAQ LLDDAISQGL TEPDIELIKR LKASGSLPMQ PFDDLLLRQY QHDIKPLIGR
TLFLKGEQAS SHADIKLLFD LPITAGKSQQ VLLQGRIDDI SPKGLVNYRP GSAHGRDVLR
LYLRHLCLMA MGHTHASYLL DMGHFHALAP ITAERAHALL ADLLVLFYQG QQYPLCFMPR
TSLAYVSCEG EHDERLQQAL PEWLDEQSQL GEGSEPHYQR LFSFPRDFSE GSFGAFAERI
CRPMVSLYLK DTLAQLEEFA LNDGMSQGQT PNVQATETQA TETRATAAHL NRDSAQGEQA
|
|---|
| |