Gene Cthe_R0039 details

Gene Information

• Locus tag: Cthe_R0039
• ID: 4808994
• Type: rRNA
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium thermocellum ATCC 27405
• Kingdom: Bacteria
• Replicon accession: NC_009012
• Strand: -
• Start bp: 2813623
• End bp: 2816530
• Gene Length: 2908 bp
• GC content: 52%
• IMG OID: 640723336
• Product: 23S ribosomal RNA

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.000978357
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GGTCAAGCTA CTAAGAGCAT AGGGTGAATG CCTCGGCACC AGAAGGCGAT GAAGGACGTG 
GTAAGCTGCG AAAAGCTGCG GTGAGGCGCA AACAGCCATC GACCCGCAGA TTTCCGAATG 
GGGGAACCCA CCTGAGGTAA ATGCTCAGGT ACTGCTGCAT GAATCCATAG TGCAGCAGGG 
CGAGACGTGG GGAACTGAAA CATCTAAGTA CCCACAGGAA AAGAAATCAA CCGAGATTCC 
GTAAGTAGTG GCGAGCGAAA GCGGAAGAGC CCAAACCGAG CTATAGCAAT ATAGTTCGGG 
GTTGCGGACC GGCATAATGA TTCTACGAGC TTAGCAGAAG TAAGCTGGAA AGCTTACACC 
ATAGAGGGTG AAAGTCCCGT ATGCGAAAAG CGAGTAGACA GGCCGGGATC CAGAGTACCA 
CGAGGCACGT GGAACCTTGT GGGAAGCAGG GGGGACCACC CTCCAAGGCT AAATACTAAC 
TGGTGACCGA TAGTGGAGAA GTACCGTGAG GGAAAGGTGA AAAGAACCCC GGGAGGGGAG 
TGAAAGAGAA CCTGAAACCC TATGTTTACA AGCAGTTGGA GAGCGTTAAA GCTCGACAGC 
GTACTTTTTG TAGAACGGTC CGGCGAGTTA TTGTATGCGG CGAGGTTAAG TACTCATAAG 
GTACGGAGCC GAAGGGAAAC CGAGTCTTAA TAGGGCGACA AGTCGCATGC AATAGACCCG 
AAACCGGGTG ACCTATCCAT GGACAGGTTG AAGCGAGAGT AAAGTCTCGT GGAGGACCGA 
ACCCGTAACC GTTGAAAAGG TTTGGGATGA GCTGTGGATA GCGGAGAAAT TCCAATCGAA 
CTCGGATATA GCTGGTTCTC CCCGAAATAG CTTTAGGGCT AGCCTCAAGT AAAGTCTGAC 
GGAGGTAAAG CACTGATTGG GCTAGGGGCC TTACCGGGTT ACCGAACCCT CTCAAACTCT 
GAATGCCGTC TAGATGTTGC TTGGGAGTCA GACTATGTGA GATAAGTTTC ATAGTCGAGA 
GGGAAACAGC CCAGACCATC AGCTAAGGTC CCAAAATCAC AGTTAAGTGG TAAAGGATGT 
GGGTTTGCTA AGACAACTAG GATGTTGGCT TAGAAGCAGC CATTCATTCA AAGAGTGCGT 
AATAGCTCAC TAGTCGAGTG AACCTGCGCC GAAAATGTTC GGGGCTAAAC TGTGTACCGA 
AGCTATGGCA GTAGAGATAC TGGGTAGGGG AGCTTACTGT GGTAGGCCGA AGCATGACCG 
GAAGGACATG TGGACGAGAC AGTAGTGAGA ATGCCGGAAT AAGTAGCGAA AGTAAAGTGA 
GAATCTTTAC CGTCGAAAGC CTAAGGTTTC CTGGGGAAGG TTCGTCCGCC CAGGGTAAGT 
CGGGACCTAA GCCGAGGCCG GAAGGCGTAG GTGATGGACA ACAGGTTGAA ATTCCTGTAC 
TACCGCTGCT CGTTTGAGAG AAGTGGGGAC GCAGGGGGAT AGGTCAAGCG AGCGACCGGA 
AGAGCTCGTC CAAAGGAGGT AGATAGACCG GTAGGGAAAT CCGCCGGTTG TTTCGAAGGC 
CTGACGGGGA GGGAAAAATA AGTACCGAAG TGACCGATTC CGCACTGACA AGAAAAGCCA 
CTATCGAGAG CAGAGGTACC CGTACCGCAA ACCGACACAG GTAGGTGAGG AGAGAATCCT 
AAGACGAGCG GGAGAAGCGT TGTTAAGGAA CTCGGCAAAT TGACCCCGTA AGTTCGCGAG 
AAGGGGTGCC TGTGAGAGCA GGCCGCAGAG AATAGGCCCA AGCAACTGTT TAACAAAAAC 
ACAGGTCTCT GCTAAATCGA AAGATGAAGT ATAGGGGCTG ACGCCTGCCC GGTGCTGGAA 
GGTTACGGGG ATCTGTTAGC GTAAGCGAAG CAGTGAACTT AAGCCCCAGT AAACGGCGGC 
CGTAACTATA ACGGTCCTAA GGTAGCGAAA TTCCTTGTCG GGTAAGTTCC GACCCGCACG 
AATGGCGTAA TGACTTGGGC GCTGTCTCAA CAACGTACCC GGCGAAATTG TAGTACTTGT 
GAAGATGCAA GTTACCCGCG ACAAGACGGA AAGACCCCAT GGAGCTTTAC TGTAGCCTGA 
TACTGGGTTT CGGTATTCTT TGTACAGGAT AGGTGGGAGG CAGAGAAGCC AGCGCGCCAG 
CGTTGGTGGA GCCGTCGTTG GGATACCACT CTAAGAATAT TGAAACTCTA ACCAGAGGCC 
GTGAACCGGT CTTGGGACAC TGTCAGGTGG GCAGTTTGAC TGGGGCGGTC GCCTCCTAAA 
AGGTAACGGA GGCGTCCAAA GGTTACCTCA GCGCGGTCGG AAATCGCGCA TCGAGTGCAA 
AGGCATAAGG TAGCCTGACT GCGAGACAGA CAAGTCGAGC AGGTACGAAA GTAGGGCTTA 
GTGATCCGGC GGTATGAAAG TGGGATTGCC GTCGCTCAAC GGATAAAAGC TACCCTGGGG 
ATAACAGGCT GATCTCCCCC AAGAGTCCAC ATCGACGGGG AGGTTTGGCA CCTCGATGTC 
GGCTCATCGC ATCCTGGAGC TGAAGTCGGT TCCAAGGGTT TGGCTGTTCG CCAATTAAAG 
CGGTACGCGA GCTGGGTTCA GAACGTCGTG AGACAGTTCG GTCCCTATCT GTCGCGGGCG 
CAGGATATTT GAAGGGATCT GTCCTTAGTA CGAGAGGACC GGGATGGACA AACCTCTGGT 
GCACCAGTTG TCACGCCAGT GGCACAGCTG GGTAGCCAAG TTTGGAGGGG ATAAACGCTG 
AAAGCATCTA AGCGTGAAAC CCACCCTAAG ATGAGATATC CCACCGAAAG GGTAAGACCC 
CATGTAGACT ACATGGTAGA TAGGCCAGAG GTGTAAGTAC AGTAATGTAC TGAGCTGACT 
GGTACTAATA GGTCGAGGGC TTGACCAA 

 

Protein sequence