Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_3227 |
Symbol | |
ID | 4810267 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 3825605 |
End bp | 3826408 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640108661 |
Product | copper amine oxidase-like protein |
Protein accession | YP_001039615 |
Protein GI | 125975705 |
COG category | |
COG ID | |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGAAAG TAGCATTGGT ATTAGCGATT GTGAGCGTGT TTATTATGTT GGTATCAGTT GCGGAAGCTG CGATAGAATT GCCGTTGAGA GTTGAAGTAA ACGGAGAAAG AGTATATTTT CCGGACGAGC AGCCATTTAT CGATTCAAAC GGGAGGACCC AGGTACCGGC GAGATTTATA GCGGAGAAGT TGGGAGCGAA TGTAACATGG GATGGAAAAG AGAAAAAGGC AGTGTTTGAG AAAGGAAGCA AGAAACTTGT TTTGTACATA GGGAAAGCAG AATATGAATT AAACGGAGAG CAGAAGAAAA TGGATACAGC TGCGCTGCTG ATATCAGGAA GGACATTTGT GCCTGCAAGA TATGTGGCAG AGGCTTTTGA TGCAAAAGTG AGCTGGGACC CGGATATAAG GACTGTATAC ATAAATACAA ATTCGAAGCC ATCTGGCAAA AAGGAAGGAA CCGAGATAGT TGCTGGATTT GAGGTGCCTT TGGATACTAA TTTGTTAGCT GTAGAGACAA CATGGGGTGG AAAAACAGAG GCCTGTTTTG AAATAAATTT ACTGAGAGCG GATGTAGAAG GACAAATTGA GGATTTAAGA CAAATACTTT TACAAAAATG TGACAGCAGT ACAGTGGATG AAGTTATAGC TTATGTTTCG CAAAAGAAGG AAAGAGAATA CTACTTGCCG TCAAAATATA TATATGATAA CAAAAGCAAA AGATATATTT GGATAAAAGA ATCTTTTATG GAAGACATAA ATGTTTTTTA TTGTTCTGCA AGCTATAAAA GGTCGGAAGA ATAA
|
Protein sequence | MKKVALVLAI VSVFIMLVSV AEAAIELPLR VEVNGERVYF PDEQPFIDSN GRTQVPARFI AEKLGANVTW DGKEKKAVFE KGSKKLVLYI GKAEYELNGE QKKMDTAALL ISGRTFVPAR YVAEAFDAKV SWDPDIRTVY INTNSKPSGK KEGTEIVAGF EVPLDTNLLA VETTWGGKTE ACFEINLLRA DVEGQIEDLR QILLQKCDSS TVDEVIAYVS QKKEREYYLP SKYIYDNKSK RYIWIKESFM EDINVFYCSA SYKRSEE
|
| |