| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_3226 |
|---|
| Symbol | |
|---|
| ID | 4809528 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 3824638 |
|---|
| End bp | 3825426 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640108660 |
|---|
| Product | copper amine oxidase-like protein |
|---|
| Protein accession | YP_001039614 |
|---|
| Protein GI | 125975704 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAG TAGCATTGGT ATTAGTAATT GTAAGTGTGT TTATTATGTT GTTATCAGTT
GCGACGGCTG CGATAGAATT GCCGTTGAGA GTTGAAGTAA ACGGAGAAAG AGTATATTTT
CCGGACGAGC AGCCATTTAT CGATTCAAAC GGGAGGACCC AGGTACCGGC GAGATTTATA
GCGGAGAAGT TGGGAGCGAA CGTAACATGG GATGGAAAAG AGAAAAAGGC AGTGTTTGAG
AAAGGAAGCA AGAAACTTGT TTTGTACATA GGGAAAGCAG AATATGAATT AAACGGAGAG
CAGAAGAAAA TGGATACAGC TGCGCTGCTG ATATCAGGAA GGACATTTGT ACCCGCGAGG
TATGTGGCAG AGGCGTTTGA TGCAACAGTG AGTTGGGATC CGGATATCAG GACAGTATAC
ATAAATACAA ATTCAAAGCC GGCTGGTAAG AAGGAAGGAA CAAAGATAGT AGCCGGGTTT
GAGGTACCTT TAGATACTAA TCTGACGGTT ACACCTACAA CATGGGGAGG ATGGACGGAG
GCTTGTTTTG AAGTAAATTT GCTACGAGCG GATGTAGAAG GACAGCTGGA AGACTTAAGA
CAAATACTTT TACAAAAATG TGACAGCAGT ACAGTGGATG AAGTTATAGC TTATGTTTCG
CAGAAAAAAG AAAGAACATA TTATTTACCT GATAAATATA TATATGACAA GAGAAGTGGA
AGGTATATAT GGGTAAAGGA ATCATTTTTA GAAGATATAA ATGTGTTTTA CTGTGCTGAG
GATTTTTAA
|
|---|
| Protein sequence | MKKVALVLVI VSVFIMLLSV ATAAIELPLR VEVNGERVYF PDEQPFIDSN GRTQVPARFI
AEKLGANVTW DGKEKKAVFE KGSKKLVLYI GKAEYELNGE QKKMDTAALL ISGRTFVPAR
YVAEAFDATV SWDPDIRTVY INTNSKPAGK KEGTKIVAGF EVPLDTNLTV TPTTWGGWTE
ACFEVNLLRA DVEGQLEDLR QILLQKCDSS TVDEVIAYVS QKKERTYYLP DKYIYDKRSG
RYIWVKESFL EDINVFYCAE DF
|
|---|
| |