| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_3218 |
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| Symbol | |
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| ID | 4809520 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 3816440 |
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| End bp | 3817435 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640108652 |
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| Product | CRISPR-associated Cas1 family protein |
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| Protein accession | YP_001039606 |
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| Protein GI | 125975696 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000280385 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTGA TTCTGAATAC ACCCGGACTT TACCTTTGTA AAAGGGGAGA GTGCTTTCAG
ATTCAAAGCG AGAATGAAAA ACGGGAAATA GCTGCAACTA AAGTTGACCA AATAATGATA
ACCACTCATG CAGCTCTTAC AACTGATGCA ATTGAACTGG CTCTTGAATA CAATATTGAC
ATAATATTTT TAAAAAACAC GGGACAACCA ATGGGGCGTG TATGGCATTC AAAACTTGGA
AGTATCAGTA CAATTAGAAG AAAACAATTA TTCCTCCAGG ATAGCCCGCT TGGGCTTCAA
CTTGTAAAAG AATGGATCTT GGAGAAAATG GATAATCAAA TACGGCTGTT AAAGAAACTG
GAAGTTAACC GCAGAGATGA TGAAAAACGT GCTATAATCA GGGATACCAT AGAAAAGATT
GAAAAGCAAA AAGCTAACAT TATGTCGATT AACAATAAAG AAACAGTGAA CAATGTAAGA
AATATGCTTC TTGGTTATGA AGGAACTGCC GGAAGAGTAT ATTTTGAAAC CCTTGGCAAG
TTGATTCCTG AGAAATATGC TTTTGAAGCG AGAAGCCGGA ATCCTGCGAA AGATCCTTTC
AACTGTATGC TCAACTATTC CTACGGTATT TTATATTCCA GCGTTGAAAA AGCCTGCATA
ATTGCAGGAT TAGACCCATA CATTGGCATT ATGCATACCG ACAATTATAA TAAGAAAGCT
CTTGTATATG ATATGGTTGA AATGTACAGA GGATATATGG ATGAAATAGT TTTCAGGCTG
TTTAGCACAA AGAAAGTTCA AGACGATTTT TTTGACAAGA TTGAAGATGG TTACTATCTC
AATAAAGAAG GAAAGCAACT GCTAATATCC GAGTATAACA AAGAGCTGGA AGTCAAAATG
AATTACAGAG GAAGAAGAAT AGAATTTGCC AACATAATCC AGTACGACTG CCATCAGATT
GCAAATCGCA TACTGAAGGA GGATATACCA TGTTGA
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| Protein sequence | MKLILNTPGL YLCKRGECFQ IQSENEKREI AATKVDQIMI TTHAALTTDA IELALEYNID
IIFLKNTGQP MGRVWHSKLG SISTIRRKQL FLQDSPLGLQ LVKEWILEKM DNQIRLLKKL
EVNRRDDEKR AIIRDTIEKI EKQKANIMSI NNKETVNNVR NMLLGYEGTA GRVYFETLGK
LIPEKYAFEA RSRNPAKDPF NCMLNYSYGI LYSSVEKACI IAGLDPYIGI MHTDNYNKKA
LVYDMVEMYR GYMDEIVFRL FSTKKVQDDF FDKIEDGYYL NKEGKQLLIS EYNKELEVKM
NYRGRRIEFA NIIQYDCHQI ANRILKEDIP C
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