| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_3208 |
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| Symbol | |
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| ID | 4809510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 3800183 |
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| End bp | 3801253 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640108642 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_001039596 |
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| Protein GI | 125975686 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2826] Transposase and inactivated derivatives, IS30 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGTAC AATATAAGTC TACCACAACT GAGCATAAGT TTAAACACTT AAGTGTTTAT
GAAAGAGGGC AGATTGCAGC TCTTTTAAAA GAAGGAAAGA GTCAACGTTA TATTGCTAAT
AAACTAGGTC GCTCGCCAAG TACAATTAGC CGTGAAATTA AAAGAGGGAC AACAATGCAG
ATGAGAACTG ATTTATCGAC ATACAAAGTA TATTTTCCTG AAACAGGGCA GGCAGTTTAT
GAGAAAAATC GTATGAATTG CGGAGCAAAG CGTAAATTGG CTCAAGTTGA AGATTTTCTT
AAGTTTGCAG AAGATAAGAT ACTACGCGAA AAATGGTCTC CAGATGCAGT TGTTGGTTTA
TGTAGGAGAG ACCCCAAGTG GCAAAATTCT ACTATTGTAT GTACCAAAAC ACTGTATAAT
TATATAGACC TGGGACTCAT AAAAGTACGA AATATAGATT TAAATCTTAA ACTACGTTTA
AAATCTAAAA TAAAAAGGAT ACGTCAAAAC AAACGGGTTG TAGGGAAAAG CATTGATCAA
AGGCCGGAAG AAGTACAATC ACGTCAAACC TTTGGGCATT GGGAAATTGA TACGGTAACA
GGCAAAAAGT CTAACGATTC AGTAATTTTA ACCTTAACTG AACGAAAAAC CCGCTACGAG
TTATTGTTTC TTTTGGACGC AAAAGACAGT AATACTGTTA ACGAGGCACT TTCAGAACTT
AAGAATTGTT ATGGTAAGGA TGTTTCAAAT GTATTTCGCA CTATAACGGC AGACAATGGT
TCTGAATTTA GTAGACTATC CGAAATGTTA CAAGGGCTAG GAATTGAAGT TTATTTCACT
CATCCTTATT CCTCATGGGA GAGAGGAACT AATGAACGTC ATAATGGACT TATTAGGCGT
TTTATTCCTA AAGGAAAGGC TATAAAAGAT TTTTCTGAAG AAACGATAAA ACGGATACAA
CAATGGTTAA ACAGCCTTCC ACGAAGGATA TTAGGTTACA AAACACCTGA AGAATGTTTT
AATGAAGAGA TACATAACCT GGTAAACAAA AATATATCAG CAATAGCCTG A
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| Protein sequence | MAVQYKSTTT EHKFKHLSVY ERGQIAALLK EGKSQRYIAN KLGRSPSTIS REIKRGTTMQ
MRTDLSTYKV YFPETGQAVY EKNRMNCGAK RKLAQVEDFL KFAEDKILRE KWSPDAVVGL
CRRDPKWQNS TIVCTKTLYN YIDLGLIKVR NIDLNLKLRL KSKIKRIRQN KRVVGKSIDQ
RPEEVQSRQT FGHWEIDTVT GKKSNDSVIL TLTERKTRYE LLFLLDAKDS NTVNEALSEL
KNCYGKDVSN VFRTITADNG SEFSRLSEML QGLGIEVYFT HPYSSWERGT NERHNGLIRR
FIPKGKAIKD FSEETIKRIQ QWLNSLPRRI LGYKTPEECF NEEIHNLVNK NISAIA
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