| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_3201 |
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| Symbol | |
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| ID | 4809503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 3791468 |
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| End bp | 3793309 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 640108635 |
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| Product | CRISPR-associated Csh1 family protein |
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| Protein accession | YP_001039589 |
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| Protein GI | 125975679 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02556] CRISPR-associated protein, TM1802 family
[TIGR02591] CRISPR-associated protein, Csh1 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.573889 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCTTGCAG GTGTATTGCA GCTGGGACAG TACGCACTCA ATAAAAAGAG TACTGACACC
GAGGAATATC TTCAAGTCAT TGAAAACCCT AATGATAAAG GCAATTACAA TCATGTCTTA
AAAATTGCAT TTGAATCTAC CGAAGGAAAC ATAGTCTATC GTGGGGTTGA ATACGAAGAG
TTCTCCTCGA AAAAAATAAA TAACTATGCA TACAAAAAGG GAAGTGCAAG GGGTGGCGAT
GTAACACCTA CTTCAAAGTA TACAGATTCA ATGAAGACTT TAAACAAGAT AATGATATCT
TTTAATGATA TTTTAAAGAG TGCAAATCAA AACAATGACG AACAAAAAAT ATTTAAAGGC
ATTTATGAAT ACATGGTTTC AAATCAAGAA AACATTGCAA ACGATATTAC GGAAAAAATC
AAATCCATCT CGTTAAAAAA AGGAGAATCT TTCATTATAA CTGTTACTTT GTTTGATAAC
AATACTGAAA AATATATGGG CAATTTTCAA TTAATAAGAA ATCATCTTGC CAGAATTTTG
AATGAACAGT ATTACAATAA ATACGGTAAA ACATCAAAAG GTAAAGGTAT CTGCTATTAT
TGTAAAAATG AAGGTGAAGT TTTCGGGTTT GTCAATACAT ATAATTCCTA CACGGTTGAT
AAAATAGGAT TTGTAACCGG TGGTTTCAAG CAGGAAAACG CGTGGAAAAA CTATCCTGTC
TGTTCTTGTT GCGCACAGAA GCTGGAGCAA GGTAAGAAAT ATATCAGAGA AAATCTTACA
TCTAAATTTT CAGGTTTCGA CTATTTCGTA ATTCCTAAAG CAGTAATAAG TGATGAACAT
GATGAAGCGG AATTTATAGA GACCCTCGAA GAATTTGAAA AAAATACGAA CTTTTCCACC
CAAGAATCCA CAAAGCAAAA CTTGCTTGGC AGTGAAAAAG ATTTTCTGGA GATAATGAAG
GACAGCAAAA ATTATCTTAA TTACAATATG CTTGTTTTTA AAGAAGAGCA GTCCGGAAGC
GTTTTTAGGA TACTTCTTTA TATAGAGGAT ATTGTGCCAA GCAGGGTAAA AAACATATTG
AGAGTAAAAG ACAGAGTAGA TGAAACAGTG CTGTTTAAAA ATCTTCCGGG TAAAGATAAT
GCAACTTATG ATTTAAAGTT TGGATTCGAT AAAATAAGGA CCTTTTTCCC GAATAACAAG
ACAGAAGGAA ATTTTGACAA AAGTTTTCTT GAGATTTTAA ACAATGTGTT TACATATAAA
AAGATAAGTT ACAAATTTCT TTTAGGGAGA ATGATTTCAA AAATAAGGAG TGATTTTGCA
AGGGAGGAAT ATGTAAAAAA CCTTGTACTT CAGGCGCTGA TGTGCATTAT GTTTATTGAT
AAGCTTAATT TGCTCAGTGG TAAAGGGAAA GAGGTGCAAA AAATAATGAT TGAGAAGACC
GAGAAAAACA AAAAATATCT TGATTTTTTT GAAAACGAAA GTTATAAGGA CGTTTTCAAT
TCAGATTATA AGAGAGCAGT TTTTTTGACA GGAGTGCTGA CGGAAAAGTT ATTAAACATC
CAATACAAAG AAAGAGGAAG CAAACCTTTC TACAGCAGGC TCAATGGCTT GAAACTGAAT
AAAAACATAG TAAAAAGAAT ATATACCGAG GCCATTAATA AATTAAATGA ATATAACAAG
AACTATTATA AAGAATTGGA ATATCTTATT GGCATGTACA TGTTGTCGGA AGAATCCCAA
AAGAATGTTT CCGATGATGA AATCAGTTTT TATTTTGTGC TTGGAATGTC ATTGGCAAGG
TTCTTTAATG AAGAAAAGAA AGACGGAGAG GATGAGGAAT AA
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| Protein sequence | MLAGVLQLGQ YALNKKSTDT EEYLQVIENP NDKGNYNHVL KIAFESTEGN IVYRGVEYEE
FSSKKINNYA YKKGSARGGD VTPTSKYTDS MKTLNKIMIS FNDILKSANQ NNDEQKIFKG
IYEYMVSNQE NIANDITEKI KSISLKKGES FIITVTLFDN NTEKYMGNFQ LIRNHLARIL
NEQYYNKYGK TSKGKGICYY CKNEGEVFGF VNTYNSYTVD KIGFVTGGFK QENAWKNYPV
CSCCAQKLEQ GKKYIRENLT SKFSGFDYFV IPKAVISDEH DEAEFIETLE EFEKNTNFST
QESTKQNLLG SEKDFLEIMK DSKNYLNYNM LVFKEEQSGS VFRILLYIED IVPSRVKNIL
RVKDRVDETV LFKNLPGKDN ATYDLKFGFD KIRTFFPNNK TEGNFDKSFL EILNNVFTYK
KISYKFLLGR MISKIRSDFA REEYVKNLVL QALMCIMFID KLNLLSGKGK EVQKIMIEKT
EKNKKYLDFF ENESYKDVFN SDYKRAVFLT GVLTEKLLNI QYKERGSKPF YSRLNGLKLN
KNIVKRIYTE AINKLNEYNK NYYKELEYLI GMYMLSEESQ KNVSDDEISF YFVLGMSLAR
FFNEEKKDGE DEE
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