| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_3200 |
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| Symbol | alaS |
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| ID | 4809502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 3782069 |
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| End bp | 3784711 |
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| Gene Length | 2643 bp |
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| Protein Length | 880 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640108634 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_001039588 |
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| Protein GI | 125975678 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0953243 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAAAT TAGGATTAAA TGAACTTAGG GAAAGGTTTT TAAAATTTTT TGAAAGCAAG
GGGCATTTGA GGCTTCCAAG TTTTTCGCTG ATTCCTCAAA ACGACCCCAG CCTTTTGTTG
ATAAATTCGG GTATGGCACC TCTAAAGCCT TATTTTACCG GGCAGGAGGA ACCACCCAGA
AGGAGAGTTA CCACTTGCCA GAAATGTATT AGAACGCCGG ACATTGAGAA TGTGGGAAAA
ACGGCAAGGC ACGGTACTTT TTTTGAAATG CTGGGTAATT TCTCTTTTGG CGACTACTTT
AAGAATGAAG CCATTCCGTG GGCGTGGGAA TTCTTTACCG AGGACCTTAA AATACCGGTG
GAGAGGTTAT GGGTATCCAT ATATGAAGAT GATGACGAAG CCTTTGAAAT ATGGAACAAA
AAAGTAGGAC TTCCCCCTGA AAGAATTGTA AGAATGGGCA AGGACAACAA CTTCTGGGAG
CATGGAACAG GCCCGTGCGG TCCCTGTTCG GAAATTTATT TTGACAGGGG CGAGGACAAG
GGCTGCGGCA AACCCGATTG CAAGGTGGGT TGCGACTGCG ACCGTTTTAT TGAGGTTTGG
AATCTGGTGT TTACGCAGTT TAACAAGGAA GAGGACGGCA GTTATTCCAG GCTTAAAAAT
CCGAACATTG ACACGGGAAT GGGTCTGGAA AGACTTGCGT GCGTGATGCA GGATGTAAAC
AATCTTTTTG AAGTGGACAC CATAAGAAGG GTATTGGATT ATATATGCAA AATTACCGGC
GTTGAATATG GCAGCTCGGA AAAAACGGAT GTATCCATAA GGGTAATAAC CGACCACATC
AGAAGCACCA CAATGATGAT ATCGGACGGA GTAATACCTT CCAACGAGGG AAGGGGCTAT
GTGTTAAGAA GGCTTTTAAG AAGGGCTGCA AGACATGGAA AGCTTCTGGG AATGGACAGA
CCTTTCCTGT CGGATGTGGC TTCGGTGGTG ATTAAAGAGT CTAAAGGCGC ATATCCGGAG
CTTGCCGAAA GAGCGGAAAA TATAAAGAAG GTTATAAGGA TTGAGGAAGA AAAGTTTGAA
GAGACTATTG ATCAGGGACT TGTAATCCTG AGCAAATATA TAGAAGAAAC CAGGAAAAAA
GGTGAAAAGG TAATAAGCGG CGATGTGGTT TTTGAACTTC ACGGCACCTA CGGTTTCCCT
GTGGACCTTA CCAGGGAGAT AGCCGAGGAA AACGGCCTTG GAGTGGATGA GGAAGGCTTC
AGGGAAAAGA TGAAAGAGCA CCAGAACCTT GCAAGGGAAG ACTATCAAAG CAAGCAGGGT
TCCGCTTGGG GTGATGATAT TTATTCAAAG CTTGACAAAA GCGTTAAAAC GGAGTTTTTG
GGATATACGG AAAGTGAAGC AACGGCCAGG GTGTTATACA TAATCAAGGA AGACCAGGTT
GTTGATGAAG CGCAAAAAGG AGACAGCGTG ACAGTTATAC TTGACAGGAC TCCTTTCTAT
GCCGAAAGCG GAGGACAGGT CGGCGACAAA GGTTTAATTG AGGCCGAAGG CGCGCGGGTA
AAGGTTTTGG ACTGCAAAAA GACCAATGAC GGAAAATACC TCCACATCGG TGAGATTGAA
GAGGGAACCT TGAGAAACGG TATGGAGGTT AAAGCCACAA TTGACAAGAA GAGAAGGATG
GCGATAGCAA GAAACCATAC CACAACCCAT CTTCTTCATA AGGCATTAAG GAATGTATTG
GGCTCTCATG TAAACCAGGC CGGTTCTTTG GTGGAGCCTG ACAGGTTGAG ATTTGACTTT
ACCCATTTTT CAGCAATGAC ACCGGAAGAA ATAAAGAGTG TCGAGGACCA GGTAAATGAG
AAAATACTGG AAAGCATTGC GGTGGACATA AGGGAAATGT CCATTGATGA AGCAAGGAAA
ATGGGCGCAA CAGCATTGTT TGGCGAAAAA TACGGAGATG TTGTAAGGGT TGTAAAGATT
GGGGATTACA GCATAGAACT GTGCGGTGGA ACTCACCTTA ATGTGACATC CCAGGCCGGA
TTTATCAAGA TAGTCAGCGA AAGCGGCGTT GCATCCGGAG TAAGAAGAAT TGAGGCTTTG
ACGGGTGAGG CTGCATTAAA GCATTTTGAC GAAGAGGAAA AACTTTTGCG TGATATAGCT
CAGGTTCTTA AGACCAATCC TTCCGACAGT GTGAAAAGGA TAGAGTCACT GTTAAATGAG
ATTAAGGCGG CCCAGAAGGA AATTGAACAG CTAAGGAGCA AGCTTGTCAG CAGTTCATTG
GATGATGTTT TGGCAAAAGC CGTGGAGATT AACGGAGTAA AGGTTGTCAC AGCCCGTTTT
GACCAGTTTG ACATGGAGGC ATTGAGAAAT ACGGGAGATA CCATAAGGAA TAAGTTGGGC
TCCGGAGTGG TGGTTCTCGG AACCGGCTTC GGAGGCAAAG TCAGTCTTGT GGTAATGGCG
ACAAAGGATG TTGTGGCAAA AGGAATTCAT GCGGGGAATA TAATTAAGGA AGCTGCCAAA
GTTGCAGGAG GCGGTGGCGG CGGACGTCCC GACATGGCTC AGGCCGGAGG GAAGGATGTG
TCAAAGATTG ACGAGGCTTT GAAGCAGGCT GTCAAGGTGA TAGAGTCGCA GCTTGCCGGT
TAA
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| Protein sequence | MEKLGLNELR ERFLKFFESK GHLRLPSFSL IPQNDPSLLL INSGMAPLKP YFTGQEEPPR
RRVTTCQKCI RTPDIENVGK TARHGTFFEM LGNFSFGDYF KNEAIPWAWE FFTEDLKIPV
ERLWVSIYED DDEAFEIWNK KVGLPPERIV RMGKDNNFWE HGTGPCGPCS EIYFDRGEDK
GCGKPDCKVG CDCDRFIEVW NLVFTQFNKE EDGSYSRLKN PNIDTGMGLE RLACVMQDVN
NLFEVDTIRR VLDYICKITG VEYGSSEKTD VSIRVITDHI RSTTMMISDG VIPSNEGRGY
VLRRLLRRAA RHGKLLGMDR PFLSDVASVV IKESKGAYPE LAERAENIKK VIRIEEEKFE
ETIDQGLVIL SKYIEETRKK GEKVISGDVV FELHGTYGFP VDLTREIAEE NGLGVDEEGF
REKMKEHQNL AREDYQSKQG SAWGDDIYSK LDKSVKTEFL GYTESEATAR VLYIIKEDQV
VDEAQKGDSV TVILDRTPFY AESGGQVGDK GLIEAEGARV KVLDCKKTND GKYLHIGEIE
EGTLRNGMEV KATIDKKRRM AIARNHTTTH LLHKALRNVL GSHVNQAGSL VEPDRLRFDF
THFSAMTPEE IKSVEDQVNE KILESIAVDI REMSIDEARK MGATALFGEK YGDVVRVVKI
GDYSIELCGG THLNVTSQAG FIKIVSESGV ASGVRRIEAL TGEAALKHFD EEEKLLRDIA
QVLKTNPSDS VKRIESLLNE IKAAQKEIEQ LRSKLVSSSL DDVLAKAVEI NGVKVVTARF
DQFDMEALRN TGDTIRNKLG SGVVVLGTGF GGKVSLVVMA TKDVVAKGIH AGNIIKEAAK
VAGGGGGGRP DMAQAGGKDV SKIDEALKQA VKVIESQLAG
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