Gene Cthe_3197 details

Gene Information

• Locus tag: Cthe_3197
• ID: 4809499
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium thermocellum ATCC 27405
• Kingdom: Bacteria
• Replicon accession: NC_009012
• Strand: +
• Start bp: 3779817
• End bp: 3780371
• Gene Length: 555 bp
• Protein Length: 184 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 640108631
• Product: PRC-barrel domain-containing protein
• Protein accession: YP_001039585
• Protein GI: 125975675
• COG category: [S] Function unknown
• COG ID: [COG3881] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.0772217
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCATAGAT ACAGTGAGGT GCTGGGGCTG CCGGTAATTT GTACGGCGGA TGGCAAAAAC 
CTTGGAACAA TAAAAGATAT AATTTTTTGT CCGAAAGAGA AAAGTGTTGT TGCCTTTTTG 
ATAGAATGCA AGGGTTACAA CAGAAGAAAA AAGGTGGTTT TTGCTTCGGA TGTTTTGAGC 
CTTGGCAGAG ACGCGCTTAT TGTTAATGAT GCCGATGACG TCAGGGATCT TAAAAAAGTT 
CTGCACAGAC CGGAATTTAA GGATAAAGGG GATATCCTGG GACTTCCCAT ATACACAAAA 
AATGGGGAAG ACCTGGGAAC GGCAAAGGAC GTATTGTTTG ACTTAAAACA CGGCAAGATA 
GACGGCATTG AAGTTTCTGA CGGATTGCTG CAGGACATAG TAAAAGGAAG AAGCGTTCTT 
CCGTTGATTG GTAAAGTTGA GTTTGGAGAA GAAAATATCC TGGTGGACAA TGAAGCGGTT 
GAGGAAATGA TGGAAACCGG AGGAGGAATT AAAAATCTGA TTGAGGGAAA CAAGAAGGTG 
CAAAGAAAGG GGTGA 

 

Protein sequence

MHRYSEVLGL PVICTADGKN LGTIKDIIFC PKEKSVVAFL IECKGYNRRK KVVFASDVLS 
LGRDALIVND ADDVRDLKKV LHRPEFKDKG DILGLPIYTK NGEDLGTAKD VLFDLKHGKI 
DGIEVSDGLL QDIVKGRSVL PLIGKVEFGE ENILVDNEAV EEMMETGGGI KNLIEGNKKV 
QRKG