Gene Cthe_3193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_3193 
Symbol 
ID4809495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand+ 
Start bp3775854 
End bp3776564 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content40% 
IMG OID640108627 
Productphospholipase C zinc-binding 
Protein accessionYP_001039581 
Protein GI125975671 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGGCA GGTTGGAGAG GACTTACGGA AAAGCATTCA GATATCTTCT TTTTGCCCTG 
AATCCCTTTA AAAAAGCGGT AATAAAAACT GAGTGCATGG TTCACAAATA TATAAATATT 
CAGGCACTGG AGATACTCAA GAATGATAAA TATATTGACG CTTACTGCCT TTTCAGCGAC 
TACATCGATG ATTTGAACAA GGGAGTGACA TGGGCCGATC AGGATTTGAA AAGTGCCAAT 
CATTTTTACA ATCCCGACAG GAAAAAAGGA CTGTATGGAA ACAATAATGC CCTCTCTTTG 
GCGGTAACGT ATTATAACAA GGCCCTGGAA TACTGGTATG ACTTGCAGCC CAACCTTGCC 
ATGTTTTATC TGGGAGCGGC GGTACACCTC GTTCAGGATA TGACCGTGCC TCACCATGCC 
AATGTCAGGC TCCTTGATAA TCACAGACAG TATGAAAATT TCATAAAAAG GACGTATCTT 
AACACTCCCA GATTCACAGT TGACAGGGGT GGCTATTATC TTTCCGGTAT AGAGGAGTAT 
ATTGTTTGCA ATGCAAGAAA TGCAATAAAA ATTTACTCAA GACTCAAAGA CATAAAGGAT 
GTCTCAAAGA GATTTTACAC CATTACAAAA TTTACCCTTA CCCTGGCCCA AAGGACCACG 
GCGGGTTGTT TTTTAACCTT TTACAAAGAT ATATCCAAAA GGCATTTATA G
 
Protein sequence
MAGRLERTYG KAFRYLLFAL NPFKKAVIKT ECMVHKYINI QALEILKNDK YIDAYCLFSD 
YIDDLNKGVT WADQDLKSAN HFYNPDRKKG LYGNNNALSL AVTYYNKALE YWYDLQPNLA 
MFYLGAAVHL VQDMTVPHHA NVRLLDNHRQ YENFIKRTYL NTPRFTVDRG GYYLSGIEEY 
IVCNARNAIK IYSRLKDIKD VSKRFYTITK FTLTLAQRTT AGCFLTFYKD ISKRHL