Gene Cthe_3159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_3159 
Symbol 
ID4809609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand+ 
Start bp3732792 
End bp3733463 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content43% 
IMG OID640108592 
ProductGntR family transcriptional regulator 
Protein accessionYP_001039547 
Protein GI125975637 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCAAGA TTGAGCATGA TGAAGGTGAA AGCTATTCGC GTTCACTGAG GGAAAAAGTA 
TTTTATCAGA TTCAAAACGA TATATTGAAT GGGGTCTATC AACCGGGAGA CAGTCTTACT 
GAAAAAAAGC TTTGTGATGA GCTTGGTGTC AGCAGGACTC CTGTGAGAGA AGCGATAAGA 
CAGCTTGAGT TGGTAGAACT TGTTCGCTCG ATCCCCAACA AGGGTGTGAT TGTGACAGGA 
ATATCCGAGA AAGATATTGA AGAAATATAT GTTATCAGGA TGATGATTGA AGGGCTTGCT 
TCAAGATGGG CGGCGGAAAA CATAACCCGG GAGGAACTGG AAGAACTTAA AGAGGCTTTG 
GACTTGCAGG AATTTTACAC ACTTAAGAAT GATATCGAGC ATTTGTTAAA ACTTGATTCC 
AGGTTTCATG ACATTTTGTT CAGGGCCAGC AAGAGCAAAC CTCTGATTCA TATATTAACT 
ACGTTCCACC ACCACATTCA AAGAGCCCGG AACGCATCCT TTGAGTCTCC TGGCAGAGCC 
AAAAAGGTTC TGGAGGAACA CAAGGCAATA TACGAAGCGG TAGTCGCAAG AGATGCCGAT 
AGAGCGGAAC AAATGACGAA AGAACATGTA AAAAACGCCA GCATTATGTA TAAACGCGTG 
TTTAAAGGTT AG
 
Protein sequence
MAKIEHDEGE SYSRSLREKV FYQIQNDILN GVYQPGDSLT EKKLCDELGV SRTPVREAIR 
QLELVELVRS IPNKGVIVTG ISEKDIEEIY VIRMMIEGLA SRWAAENITR EELEELKEAL 
DLQEFYTLKN DIEHLLKLDS RFHDILFRAS KSKPLIHILT TFHHHIQRAR NASFESPGRA 
KKVLEEHKAI YEAVVARDAD RAEQMTKEHV KNASIMYKRV FKG