| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_3149 |
|---|
| Symbol | |
|---|
| ID | 4809712 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 3721116 |
|---|
| End bp | 3722546 |
|---|
| Gene Length | 1431 bp |
|---|
| Protein Length | 476 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640108582 |
|---|
| Product | aminoacyl-histidine dipeptidase |
|---|
| Protein accession | YP_001039537 |
|---|
| Protein GI | 125975627 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2195] Di- and tripeptidases |
|---|
| TIGRFAM ID | [TIGR01893] aminoacyl-histidine dipeptidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.35499 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAACAA TTCACACAAT CGAGCCGCGC AAAGTGTTTC ACTGGTTTTA TCAAATTAAC
CAGATTCCGC GATGTTCCGG CAATGAAAAA AGAATCAGCG ATTTTTTGGT GAATTTCGCC
AGAGAAAGAA ATCTGGAAGT TTATCAGGAC GAACTTTACA ACGTAATCAT CAAAAAGCCT
GCAACTCCGG GCTATGAAAA TGCGCCTGCC GTCATTATAC AAGGCCACAG TGACATGGTC
TGCATAAAAG GTGAAGGTTC CAACCATAAT TTTGACACGG ATCCTATCGA AATGATTGTG
GAAGGTGACA TTTTAAGAGC GAACAACACA ACCCTTGGCG GAGACGATGG GATTGCCGTT
GCTTACGGTT TGGCAATTTT GGATTCCGAT GATTTAAAAC ATCCTGCCAT TGAACTTTTG
GTCACGACGA GGGAAGAGAC GGGCATGGAC GGGGCGATGG CTCTGACCGG TGAACATTTA
AGCGGGAAAA TACTGCTTAA CATTGATTCA GACGAGGAAG GTGTTTTTTT AGTCAGCTGT
GCCGGCGGTG CAAACCAGAT TGTTACCTTC CCGTTAAAAA AGGAGAAGAA AAGAGGCACG
GGCCTTAAAA TTAAAGTTTC CGGCCTTAAA GGCGGCCACT CCGGAATGGA GATTGTCAAG
CAAAGGGCAA ACGCAATTAA ACTTTTGGCC CGTATTTTGG ACCAATGCAG GGACAAGGTT
ACTTTGGCAA AGATTACGGG TGGCAGCAAA CATAATGCAA TTCCAAAGGA AGCGGAAGCG
GTTGTTTTGA CAGAAGATTT GGAAGGCACG GTACGTATAG TAGAGTCCCT GGCAAAGGAA
TTGAAAGAAG AATACCGGGT GGAAGACAGC GGACTTACTG TTACCGTAAC GGAAGTTGGA
GTTGAAGAAG TTTTCTTAAA GCAAATATCC AACGATGTAA TTGATTTTCT GATGATGACG
CCGGACGGCG TTCAGTATAT GTCAAAGGAT ATCGAAGGTT TGGTTCAGAC GAGTGTCAAC
AATGCCGTGG TGGAAGAAAA AGAAGGGCGG CTCGTTGTTA CAATATCTCT CCGTTCTTCA
TCGGAAAGTT CTTTAAGAGA AATGTTAAAC CGTGTAGCGC TGATTGCAAA AAGGACAAAC
GGGATGGCCA AAGAAAGCAA TTTTTATCCG GCATGGGAGT ATGATGACAA GTCTGAAATA
AGAAAAACGG CAGTCAGGGT TTATGAAGAG ATGTTTGACA AAAAAGCAAA ATTGACTGCG
GTTCATGCGG GACTTGAATG CGGTGTGCTC AAGAAAAAAT TGCCTGATGT TGATATGATT
AGTTTCGGGC CAAATTTATA TGACATTCAT ACGGAAAAAG AGCATCTTAG CATCTCATCG
GTGGAAAGAG TTTGGAGATT TCTAATTCGT TTGCTTGAAG AGATAAAATA A
|
|---|
| Protein sequence | MSTIHTIEPR KVFHWFYQIN QIPRCSGNEK RISDFLVNFA RERNLEVYQD ELYNVIIKKP
ATPGYENAPA VIIQGHSDMV CIKGEGSNHN FDTDPIEMIV EGDILRANNT TLGGDDGIAV
AYGLAILDSD DLKHPAIELL VTTREETGMD GAMALTGEHL SGKILLNIDS DEEGVFLVSC
AGGANQIVTF PLKKEKKRGT GLKIKVSGLK GGHSGMEIVK QRANAIKLLA RILDQCRDKV
TLAKITGGSK HNAIPKEAEA VVLTEDLEGT VRIVESLAKE LKEEYRVEDS GLTVTVTEVG
VEEVFLKQIS NDVIDFLMMT PDGVQYMSKD IEGLVQTSVN NAVVEEKEGR LVVTISLRSS
SESSLREMLN RVALIAKRTN GMAKESNFYP AWEYDDKSEI RKTAVRVYEE MFDKKAKLTA
VHAGLECGVL KKKLPDVDMI SFGPNLYDIH TEKEHLSISS VERVWRFLIR LLEEIK
|
|---|
| |