Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_3142 |
Symbol | |
ID | 4809705 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 3712286 |
End bp | 3712774 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640108575 |
Product | hypothetical protein |
Protein accession | YP_001039530 |
Protein GI | 125975620 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.000238229 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAATTG TCTATGAATC AAAAACGGGT TTTACCAAAA AATATGCTGA TATGCTCGCG GAAAAGACGA AACTTAAAGC CTATAGGGTA AAAGAACTTC CGGAGTCTGT TAAAGACGAA GAAATAATAT TTCTTGGCTG GCTAAAAGCA GGTAAAATAC AAGGGCTTGG CAAAGCCAGA AAGTACAATG TCAAGGCTGT TTGTGCATCA GGCACTGCAA GAACAGCTGA GCCTGATGAA GAAACAGTCA TTGCAAGGAA CAAAGTAAAA GGCATACCGT TTTTTTATCT GCGCGGTGGG TGTTTGCCTT TAAAGGAGCT TAAAGGCATG GATAAAATCT TGATGTCCAT GTTTTTAAAA ATACTAAAAA GCCGCAAAGA GAAAGATGAA AGAATTAACG AAGCCATTTC AAACATTGTA AATGGTTTTG ACGGTGTGAG AGAGGAAAAT CTTGAGCCTG TGCTTAAGTG GCTGGACAAA AACAAGTAA
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Protein sequence | MIIVYESKTG FTKKYADMLA EKTKLKAYRV KELPESVKDE EIIFLGWLKA GKIQGLGKAR KYNVKAVCAS GTARTAEPDE ETVIARNKVK GIPFFYLRGG CLPLKELKGM DKILMSMFLK ILKSRKEKDE RINEAISNIV NGFDGVREEN LEPVLKWLDK NK
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