Gene Cthe_3142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_3142 
Symbol 
ID4809705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp3712286 
End bp3712774 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content38% 
IMG OID640108575 
Producthypothetical protein 
Protein accessionYP_001039530 
Protein GI125975620 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000238229 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAATTG TCTATGAATC AAAAACGGGT TTTACCAAAA AATATGCTGA TATGCTCGCG 
GAAAAGACGA AACTTAAAGC CTATAGGGTA AAAGAACTTC CGGAGTCTGT TAAAGACGAA
GAAATAATAT TTCTTGGCTG GCTAAAAGCA GGTAAAATAC AAGGGCTTGG CAAAGCCAGA
AAGTACAATG TCAAGGCTGT TTGTGCATCA GGCACTGCAA GAACAGCTGA GCCTGATGAA
GAAACAGTCA TTGCAAGGAA CAAAGTAAAA GGCATACCGT TTTTTTATCT GCGCGGTGGG
TGTTTGCCTT TAAAGGAGCT TAAAGGCATG GATAAAATCT TGATGTCCAT GTTTTTAAAA
ATACTAAAAA GCCGCAAAGA GAAAGATGAA AGAATTAACG AAGCCATTTC AAACATTGTA
AATGGTTTTG ACGGTGTGAG AGAGGAAAAT CTTGAGCCTG TGCTTAAGTG GCTGGACAAA
AACAAGTAA
 
Protein sequence
MIIVYESKTG FTKKYADMLA EKTKLKAYRV KELPESVKDE EIIFLGWLKA GKIQGLGKAR 
KYNVKAVCAS GTARTAEPDE ETVIARNKVK GIPFFYLRGG CLPLKELKGM DKILMSMFLK
ILKSRKEKDE RINEAISNIV NGFDGVREEN LEPVLKWLDK NK